Automated omics-scale protein modeling and simulation setup.
-
Updated
Sep 20, 2021 - Python
#
modeller
Here are 22 public repositories matching this topic...
An automated pipeline for homology-modeling based on modeller
-
Updated
Nov 25, 2020 - Python
Simple Modeler for Arknights:Endfield to keep track of production lines
-
Updated
Feb 8, 2026 - C#
This is a repository of Modeller automation(Linux version), which will help us to develop exclusive codes for Bioinformatics. We are curious Computer Science people, who are exploring Bioinformatics, This project is also a part of that voyage.
-
Updated
Dec 27, 2018 - Parrot
AlphaMod's official repository for protein folding
-
Updated
Jul 1, 2026 - Python
Generating PDB Structure Models via Modeller-Python
-
Updated
Nov 22, 2020 - Python
EasyModel: a user-friendly web-based interface based on MODELLER - https://doi.org/10.1038/s41598-023-44505-9
-
Updated
May 10, 2024 - PHP
A Python-based comparative modeling workflow using MODELLER to build homology models from a target FASTA and template PDB, with comparison against a Swiss-Model structure.
pdb protein-structure biopython pymol structural-bioinformatics homology-modeling modeller comparative-modeling
-
Updated
Dec 30, 2025 - Python
Homology Modelling of the human cryptochrome-1 using mouse cryptochrome-1
-
Updated
Jun 12, 2023 - Python
Homology modeling of alpha-amylase using bioinformatics tools to predict 3D protein structure and analyze structural features.
-
Updated
Apr 19, 2026 - Python
ProSutra is an automated pipeline for protein structure prediction, validation, and report generation with CLI, Streamlit, and Electron interfaces.
bioinformatics protein-structure computational-biology bioinformatics-pipeline bioinformatics-analysis dssp modeller protein-structure-prediction bioinformatics-tool freesasa computational-biology-datasets protein-validation molprobity robetta qmean voromqa
-
Updated
Mar 19, 2026 - Python
Bioinformatics Course - Protein Module Practice
-
Updated
Sep 23, 2024 - Parrot
A Python script that compares predicted protein structures (AlphaFold2, MODELLER, RoseTTAFold) against an experimental reference for a single target, reporting quality/fit metrics.
python pdb protein-structure model-evaluation structural-bioinformatics modeller alphafold2 rosettafold
-
Updated
Dec 30, 2025 - Python
Computational structural characterisation of PfMSP3.1 SPAM, including modelling, MD, docking, AlphaFold and experimental NMR-restraint reassessment.
bioinformatics reproducible-research protein-structure molecular-dynamics computational-biology protein protein-sequences malaria gromacs coiled-coil structural-bioinformatics sequence-analysis modeller protein-folding protein-docking plasmodium-falciparum alphafold alphafold3 pfmsp3 nmr-restraints
-
Updated
Sep 8, 2026 - Python
A script to generate a tripeptide database. At present, the amino acids of tripeptides produced are not complete
-
Updated
May 18, 2021 - Python
Codex Cowork is a Codex-first cowork control plane and specialist-agent plugin.
-
Updated
Apr 12, 2026 - TypeScript
Assess models previously generated with modeller with the DOPE method
-
Updated
Oct 26, 2023 - Python
Add this topic to your repo
To associate your repository with the modeller topic, visit your repo's landing page and select "manage topics."