Merge pull request #65 from yuvipanda/openrefine

chicocvenancio · web-flow · commit 38872f3bbb7c · 2021-05-22T15:11:59.000-03:00
Setup OpenRefine on PAWS
diff --git a/images/singleuser/Dockerfile b/images/singleuser/Dockerfile
@@ -57,6 +57,7 @@ RUN apt-get update --yes > /dev/null && \
         r-recommended \
         r-base-dev \
         r-cran-littler \
+        openjdk-11-jdk \
         nodejs > /dev/null
 
 # Utilities
@@ -88,6 +89,11 @@ RUN curl --silent --location --fail ${RSTUDIO_URL} > /tmp/rstudio.deb && \
     dpkg -i /tmp/rstudio.deb && \
     rm /tmp/rstudio.deb
 
+# Setup OpenRefine
+ENV OPENREFINE_DIR /srv/openrefine
+RUN mkdir -p ${OPENREFINE_DIR} && cd ${OPENREFINE_DIR} && \
+    curl -L https://github.com/OpenRefine/OpenRefine/releases/download/3.4.1/openrefine-linux-3.4.1.tar.gz | tar xzf - --strip=1
+COPY proxies/openrefine-logo.svg ${OPENREFINE_DIR}}/openrefine-logo.svg
 
 # Machine-learning type stuff
 RUN apt-get install --yes \
@@ -179,4 +185,7 @@ COPY banner /etc/bash.bashrc
 # use custom css to hide clusters tab
 COPY --chown=tools.paws:tools.paws hide_clusters_tab.css /home/paws/.jupyter/custom/custom.css
 
-EXPOSE 8888
+# Setup custom config as needed
+COPY jupyter_notebook_config.py /srv/paws/etc/jupyter/jupyter_notebook_config.py
+
+EXPOSE 8888
diff --git a/images/singleuser/jupyter_notebook_config.py b/images/singleuser/jupyter_notebook_config.py
@@ -0,0 +1,26 @@
+# Disable flake8 for this file, since it's a config file not just python
+# flake8: noqa
+import os
+
+openrefine_path = os.path.join(os.environ["OPENREFINE_DIR"], "refine")
+openrefine_logo_path = os.path.join(
+    os.environ["OPENREFINE_DIR"], "openrefine-logo.svg"
+)
+c.ServerProxy.servers = {
+    "openrefine": {
+        "command": [
+            openrefine_path,
+            "-p",
+            "{port}",
+            "-d",
+            os.path.expanduser("~"),
+        ],
+        "port": 3333,
+        "timeout": 120,
+        "launcher_entry": {
+            "enabled": True,
+            "icon_path": openrefine_logo_path,
+            "title": "OpenRefine",
+        },
+    },
+}
diff --git a/images/singleuser/proxies/openrefine-logo.svg b/images/singleuser/proxies/openrefine-logo.svg
