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# Copyright 2020 The SQLFlow Authors. All rights reserved.
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import functools
import os
import numpy as np
import tensorflow as tf
from runtime import db
from runtime.dbapi.paiio import PaiIOConnection
from runtime.feature.field_desc import DataType
from runtime.tensorflow.get_tf_model_type import is_tf_estimator
from runtime.tensorflow.get_tf_version import tf_is_version2
from runtime.tensorflow.import_model import import_model
from runtime.tensorflow.input_fn import (get_dtype,
parse_sparse_feature_predict,
tf_generator)
from runtime.tensorflow.keras_with_feature_column_input import \
init_model_with_feature_column
from runtime.tensorflow.load_model import (load_keras_model_weights,
pop_optimizer_and_loss)
# Disable TensorFlow INFO and WARNING logs
os.environ['TF_CPP_MIN_LOG_LEVEL'] = '3'
# Disable TensorFlow INFO and WARNING logs
if tf_is_version2():
import logging
tf.get_logger().setLevel(logging.ERROR)
else:
tf.logging.set_verbosity(tf.logging.ERROR)
def encode_pred_result(result):
if isinstance(result, (list, tuple)):
result = np.array(result)
if isinstance(result, np.ndarray):
result = result.flatten()
if len(result) > 1:
# NOTE(typhoonzero): if the output dimension > 1, format
# output tensor using a comma separated string. Only
# available for keras models.
return ",".join([str(i) for i in result])
else:
return str(result[0])
else:
return str(result)
def keras_predict(estimator, model_params, save, result_table,
feature_column_names, feature_metas, train_label_name,
result_col_name, conn, predict_generator, selected_cols,
extra_result_cols):
pop_optimizer_and_loss(model_params)
classifier = init_model_with_feature_column(estimator, model_params)
def eval_input_fn(batch_size, cache=False):
feature_types = []
for name in feature_column_names:
# NOTE: vector columns like 23,21,3,2,0,0 should use shape None
if feature_metas[name]["is_sparse"]:
feature_types.append((tf.int64, tf.int32, tf.int64))
else:
feature_types.append(get_dtype(feature_metas[name]["dtype"]))
tf_gen = tf_generator(predict_generator, selected_cols,
feature_column_names, feature_metas)
dataset = tf.data.Dataset.from_generator(tf_gen,
(tuple(feature_types), ))
ds_mapper = functools.partial(
parse_sparse_feature_predict,
feature_column_names=feature_column_names,
feature_metas=feature_metas)
dataset = dataset.map(ds_mapper).batch(batch_size)
if cache:
dataset = dataset.cache()
return dataset
def to_feature_sample(row, selected_cols):
features = {}
for name in feature_column_names:
row_val = row[selected_cols.index(name)]
if feature_metas[name].get("delimiter_kv", "") != "":
# kv list that should be parsed to two features.
if feature_metas[name]["is_sparse"]:
features[name] = tf.SparseTensor(
row_val[0], tf.ones_like(tf.reshape(row_val[0], [-1])),
row_val[2])
features["_".join([name,
"weight"])] = tf.SparseTensor(*row_val)
else:
raise ValueError(
"not supported DENSE column with key:value"
"list format.")
else:
if feature_metas[name]["is_sparse"]:
features[name] = tf.SparseTensor(*row_val)
else:
features[name] = tf.constant(([row_val], ))
return features
if not hasattr(classifier, 'sqlflow_predict_one'):
# NOTE: load_weights should be called by keras models only.
# NOTE: always use batch_size=1 when predicting to get the pairs of
# features and predict results to insert into result table.
pred_dataset = eval_input_fn(1)
one_batch = next(iter(pred_dataset))
# NOTE: must run predict one batch to initialize parameters. See:
# https://www.tensorflow.org/alpha/guide/keras/saving_and_serializing#saving_subclassed_models # noqa: E501
classifier.predict_on_batch(one_batch)
load_keras_model_weights(classifier, save)
# pred_dataset = eval_input_fn(1, cache=True).make_one_shot_iterator()
pred_dataset = eval_input_fn(1, cache=True).__iter__()
column_names = selected_cols[:]
try:
train_label_index = selected_cols.index(train_label_name)
except: # noqa: E722
train_label_index = -1
if train_label_index != -1:
del column_names[train_label_index]
column_names.append(result_col_name)
column_names.extend(extra_result_cols)
with db.buffered_db_writer(conn, result_table, column_names, 100) as w:
for row, _ in predict_generator():
features = to_feature_sample(row, column_names)
if hasattr(classifier, 'sqlflow_predict_one'):
result = classifier.sqlflow_predict_one(features)
else:
result = classifier.predict_on_batch(features)
if extra_result_cols:
assert isinstance(
result, tuple
), "TO PREDICT must return a " \
"tuple when predict.extra_outputs is not empty"
assert len(extra_result_cols) + 1 <= len(
result
), "TO PREDICT must return at least " \
"%d items instead of %d" % (len(extra_result_cols) + 1,
len(result))
extra_pred_outputs = result[1:len(extra_result_cols) + 1]
result = result[0:1]
else:
extra_pred_outputs = None
# FIXME(typhoonzero): determine the predict result is
# classification by adding the prediction result together
# to see if it is close to 1.0.
if len(result[0]) == 1: # regression result
result = result[0][0]
else:
sum = 0
for i in result[0]:
sum += i
if np.isclose(sum, 1.0): # classification result
result = result[0].argmax(axis=-1)
else:
result = result[0] # multiple regression result
row.append(encode_pred_result(result))
if extra_pred_outputs is not None:
row.extend([encode_pred_result(p) for p in extra_pred_outputs])
if train_label_index != -1 and len(row) > train_label_index:
del row[train_label_index]
w.write(row)
del pred_dataset
def write_cols_from_selected(result_col_name, selected_cols):
write_cols = selected_cols[:]
if result_col_name in selected_cols:
target_col_index = selected_cols.index(result_col_name)
del write_cols[target_col_index]
else:
target_col_index = -1
# always keep the target column to be the last column
# on writing prediction result
write_cols.append(result_col_name)
return write_cols, target_col_index
def estimator_predict(result_table, feature_column_names, feature_metas,
train_label_name, result_col_name, conn,
predict_generator, selected_cols):
write_cols = selected_cols[:]
try:
train_label_index = selected_cols.index(train_label_name)
except ValueError:
train_label_index = -1
if train_label_index != -1:
del write_cols[train_label_index]
write_cols.append(result_col_name)
# load from the exported model
with open("exported_path", "r") as fn:
export_path = fn.read()
if tf_is_version2():
imported = tf.saved_model.load(export_path)
else:
imported = tf.saved_model.load_v2(export_path)
def add_to_example(example, x, i):
feature_name = feature_column_names[i]
dtype_str = feature_metas[feature_name]["dtype"]
if feature_metas[feature_name]["delimiter"] != "":
if feature_metas[feature_name]["delimiter_kv"] != "":
keys = x[0][i][0].flatten()
weights = x[0][i][1].flatten()
weight_dtype_str = feature_metas[feature_name]["dtype_weight"]
if (dtype_str == "float32" or dtype_str == "float64"
or dtype_str == DataType.FLOAT32):
raise ValueError(
"not supported key-value feature with key type float")
elif (dtype_str == "int32" or dtype_str == "int64"
or dtype_str == DataType.INT64):
example.features.feature[
feature_name].int64_list.value.extend(list(keys))
elif (dtype_str == "string" or dtype_str == DataType.STRING):
example.features.feature[
feature_name].bytes_list.value.extend(list(keys))
if (weight_dtype_str == "float32"
or weight_dtype_str == "float64"
or weight_dtype_str == DataType.FLOAT32):
example.features.feature["_".join(
[feature_name,
"weight"])].float_list.value.extend(list(weights))
else:
raise ValueError(
"not supported key value column weight data type: %s" %
weight_dtype_str)
else:
# NOTE(typhoonzero): sparse feature will get
# (indices,values,shape) here, use indices only
values = x[0][i][0].flatten()
if (dtype_str == "float32" or dtype_str == "float64"
or dtype_str == DataType.FLOAT32):
example.features.feature[
feature_name].float_list.value.extend(list(values))
elif (dtype_str == "int32" or dtype_str == "int64"
or dtype_str == DataType.INT64):
example.features.feature[
feature_name].int64_list.value.extend(list(values))
else:
if (dtype_str == "float32" or dtype_str == "float64"
or dtype_str == DataType.FLOAT32):
# need to pass a tuple(float, )
example.features.feature[feature_name].float_list.value.extend(
(float(x[0][i][0]), ))
elif (dtype_str == "int32" or dtype_str == "int64"
or dtype_str == DataType.INT64):
example.features.feature[feature_name].int64_list.value.extend(
(int(x[0][i][0]), ))
elif dtype_str == "string" or dtype_str == DataType.STRING:
example.features.feature[feature_name].bytes_list.value.extend(
x[0][i])
def predict(x):
example = tf.train.Example()
for i in range(len(feature_column_names)):
add_to_example(example, x, i)
return imported.signatures["predict"](
examples=tf.constant([example.SerializeToString()]))
with db.buffered_db_writer(conn, result_table, write_cols, 100) as w:
for row, _ in predict_generator():
features = db.read_features_from_row(row,
selected_cols,
feature_column_names,
feature_metas,
is_xgboost=False)
result = predict((features, ))
if train_label_index != -1 and len(row) > train_label_index:
del row[train_label_index]
if "class_ids" in result:
row.append(str(result["class_ids"].numpy()[0][0]))
else:
# regression predictions
row.append(str(result["predictions"].numpy()[0][0]))
w.write(row)
def pred(datasource,
estimator_string,
select,
result_table,
feature_columns,
feature_column_names,
feature_column_names_map,
train_label_name,
result_col_name,
feature_metas={},
model_params={},
pred_params={},
save="",
batch_size=1,
pai_table=""):
estimator = import_model(estimator_string)
model_params.update(feature_columns)
is_estimator = is_tf_estimator(estimator)
if pai_table != "":
conn = PaiIOConnection.from_table(pai_table)
selected_cols = db.selected_cols(conn, None)
predict_generator = db.db_generator(conn, None)
else:
conn = db.connect_with_data_source(datasource)
selected_cols = db.selected_cols(conn, select)
predict_generator = db.db_generator(conn, select)
pop_optimizer_and_loss(model_params)
if pred_params is None:
extra_result_cols = []
else:
extra_result_cols = pred_params.get("extra_outputs", "")
extra_result_cols = [
c.strip() for c in extra_result_cols.split(",") if c.strip()
]
if not is_estimator:
if not issubclass(estimator, tf.keras.Model):
# functional model need field_metas parameter
model_params["field_metas"] = feature_metas
print("Start predicting using keras model...")
keras_predict(estimator, model_params, save, result_table,
feature_column_names, feature_metas, train_label_name,
result_col_name, conn, predict_generator, selected_cols,
extra_result_cols)
else:
# TODO(sneaxiy): support extra_result_cols for estimator
model_params['model_dir'] = save
print("Start predicting using estimator model...")
estimator_predict(result_table, feature_column_names, feature_metas,
train_label_name, result_col_name, conn,
predict_generator, selected_cols)
print("Done predicting. Predict table : %s" % result_table)