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Commits on Oct 27, 2017

• New test for #712, thanks @larsonmattr

  josemduarte

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Commits on Oct 26, 2017

• Minor bugfix and some new tests for it

  josemduarte

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Commits on Oct 19, 2017

• Update readme.md

  josemduarte

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Commits on Oct 18, 2017

• [maven-release-plugin] prepare for next development iteration

  josemduarte

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• [maven-release-plugin] prepare release biojava-5.0.0-alpha13

  josemduarte

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• [maven-release-plugin] prepare for next development iteration

  josemduarte

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• [maven-release-plugin] prepare release biojava-5.0.0-alpha13

  josemduarte

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• [maven-release-plugin] prepare for next development iteration

  josemduarte

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• [maven-release-plugin] prepare release biojava-5.0.0-alpha13

  josemduarte

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• Merge pull request #706 from josemduarte/issue704

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  josemduarte

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• Merge pull request #711 from valasatava/master

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  josemduarte

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Commits on Oct 17, 2017

• ignore chains that do not have representative atoms, e.g. 4LKE chain G.

  valasatava

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Commits on Oct 16, 2017

• Merge pull request #710 from josemduarte/issue708

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Commits on Oct 11, 2017

• Now identical clustering performed on 95% identical sequences

  josemduarte

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Commits on Oct 10, 2017

• Better fix for null subunits as advised by @lafita

  josemduarte

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Commits on Oct 9, 2017

• A fix for #708

  josemduarte

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• Small fix for cloning

  josemduarte

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• Merge pull request #709 from valasatava/master

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  josemduarte

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Commits on Oct 7, 2017

• several fixes for biological assemblies calculations

  valasatava

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Commits on Oct 5, 2017

• A new dome for quat symmetry detection

  josemduarte

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Commits on Oct 4, 2017

• New bioassembly demo

  josemduarte

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Commits on Oct 3, 2017

• Updating genenames.org url to https

  josemduarte

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Commits on Sep 8, 2017

• Making it clear that the soft memory cache is a singleton

  josemduarte

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• Fix for new tests so that they don't pollute other tests

  josemduarte

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• Solving #704 and adding some tests for #703

  josemduarte

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• Fixing phosphosite urls and changing default url timeout to 30s

  josemduarte

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Commits on Aug 22, 2017

• Merge pull request #701 from valasatava/bug-fix-yana

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Commits on Aug 15, 2017

• improvements

  valasatava

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• Setter for chromosome coordinate systems: 0-based, 1-based

  valasatava

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• unit test fix

  valasatava

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• CDS length calculation bug fix

  valasatava

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Commits on Aug 10, 2017

• Merge pull request #691 from lukeczapla/master

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  lafita

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• Merge pull request #698 from tulay/obo-namespace

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  lafita

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Commits on Aug 9, 2017

• throw exception instead of fail

  tulay

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• fixed minor issue with lack of this keyword, re-ran tests

  

  luke czapla

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