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/* Projects */
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_wikis/BioJava:BioJavaInside.md

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framework and application for the comparison and mapping of protein
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sets. Uses BioJava for handling most input data formats.
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- <http://www.cytoscape.org> Cytoscape]: An open source bioinformatics
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software platform for visualizing molecular interaction networks.
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Publications
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_wikis/BioJava:BioJavaInside.mediawiki

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* [http://webclu.bio.wzw.tum.de/prompt PROMPT]: A free, open source framework and application for the comparison and mapping of protein sets. Uses BioJava for handling most input data formats.
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* http://www.cytoscape.org Cytoscape]: An open source bioinformatics software platform for visualizing molecular interaction networks.
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== Publications ==
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BioJava has been used in the following publications. If you know of other publications please add them.
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