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_wikis/BioJava:CookBook:PDB:read.md

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@@ -30,10 +30,10 @@ parser deals with SEQRES and ATOM records please see
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`pdbread.setParseSecStruc(true);`
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`// align the SEQRES and ATOM records, default = true   `
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`// slows the parsing speed slightly down, so if speed matters, turn it off.`
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`// slows the parsing speed slightly down, so if speed matters turn it off.`
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`pdbreader.setAlignSeqRes(true);`
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` `
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`// parse the C-alpha atoms onlym default = false`
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`// parse the C-alpha atoms only, default = false`
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`pdbpars.setParseCAOnly(false);`
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`// download missing PDB files automatically from EBI ftp server, default = false`

_wikis/BioJava:CookBook:PDB:read.mediawiki

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@@ -20,10 +20,10 @@ see [[BioJava:CookBook:PDB:seqres]]
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pdbread.setParseSecStruc(true);
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// align the SEQRES and ATOM records, default = true
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// slows the parsing speed slightly down, so if speed matters, turn it off.
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// slows the parsing speed slightly down, so if speed matters turn it off.
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pdbreader.setAlignSeqRes(true);
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// parse the C-alpha atoms onlym default = false
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// parse the C-alpha atoms only, default = false
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pdbpars.setParseCAOnly(false);
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// download missing PDB files automatically from EBI ftp server, default = false

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