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/* biojava3-alignment */
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_wikis/BioJava:CookBook4.0.md

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**Required modules**: *biojava3-alignment, biojava3-core,
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biojava3-phylo*
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- How can I calculate a pairwise Sequence Alignment? (Smith Waterman,
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Needleman Wunsch)
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- [How can I create a Multiple Sequence
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Alignment](BioJava:CookBook:MSA "wikilink")?
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_wikis/BioJava:CookBook4.0.mediawiki

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'''Required modules''': ''biojava3-alignment, biojava3-core, biojava3-phylo''
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* How can I calculate a pairwise Sequence Alignment? (Smith Waterman, Needleman Wunsch)
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* [[BioJava:CookBook:MSA|How can I create a Multiple Sequence Alignment]]?
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=== Protein Structure ===

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