update to 1.8

Gwaldon · andreasprlic · commit 5f84ceed5877 · 2016-03-18T23:29:01.000-07:00
diff --git a/wiki/BioJava:Cookbook:Alphabets:Cononical.md b/wiki/BioJava:Cookbook:Alphabets:Cononical.md
@@ -6,23 +6,23 @@ How can I tell if two Symbols or Alphabets are equal?
 -----------------------------------------------------
 
 In Biojava the same
-[Alphabets](http://www.biojava.org/docs/api14/org/biojava/bio/symbol/Alphabet.html)
+[Alphabets](http://www.biojava.org/docs/api1.8/org/biojava/bio/symbol/Alphabet.html)
 and the same
-[Symbols](http://www.biojava.org/docs/api14/org/biojava/bio/symbol/Symbol.html)
+[Symbols](http://www.biojava.org/docs/api1.8/org/biojava/bio/symbol/Symbol.html)
 are canonical no matter how they were constructed or where they came
 from. This means that if two [DNA](wp:DNA "wikilink") alphabets (or
-[Symbols](http://www.biojava.org/docs/api14/org/biojava/bio/symbol/Symbol.html)
+[Symbols](http://www.biojava.org/docs/api1.8/org/biojava/bio/symbol/Symbol.html)
 from those alphabets) are instantiated at different times are equal via
 both the .equals() and == functions. Also Symbols from the PROTEIN and
 the PROTEIN-TERM alphabets are canonical as are Symbols from the
-[IntegerAlphabet](http://www.biojava.org/docs/api14/org/biojava/bio/symbol/IntegerAlphabet.html)
+[IntegerAlphabet](http://www.biojava.org/docs/api1.8/org/biojava/bio/symbol/IntegerAlphabet.html)
 and the
-[SubIntegerAlphabet](http://www.biojava.org/docs/api14/org/biojava/bio/symbol/IntegerAlphabet.SubIntegerAlphabet.html).
+[SubIntegerAlphabet](http://www.biojava.org/docs/api1.8/org/biojava/bio/symbol/IntegerAlphabet.SubIntegerAlphabet.html).
 
 This is even true of
-[Alphabets](http://www.biojava.org/docs/api14/org/biojava/bio/symbol/Alphabet.html)
+[Alphabets](http://www.biojava.org/docs/api1.8/org/biojava/bio/symbol/Alphabet.html)
 and
-[Symbols](http://www.biojava.org/docs/api14/org/biojava/bio/symbol/Symbol.html)
+[Symbols](http://www.biojava.org/docs/api1.8/org/biojava/bio/symbol/Symbol.html)
 on different virtual machines (thanks to some
 [Serialization](http://java.sun.com/j2se/1.4.2/docs/api/java/io/Serializable.html)
 magic) which means BioJava works across RMI.
diff --git a/wiki/BioJava:Cookbook:Alphabets:Cononical.mediawiki b/wiki/BioJava:Cookbook:Alphabets:Cononical.mediawiki
@@ -1,8 +1,8 @@
 == How can I tell if two Symbols or Alphabets are equal? ==
 
-In Biojava the same [http://www.biojava.org/docs/api14/org/biojava/bio/symbol/Alphabet.html Alphabets] and the same [http://www.biojava.org/docs/api14/org/biojava/bio/symbol/Symbol.html Symbols] are canonical no matter how they were constructed or where they came from. This means that if two [[wp:DNA|DNA]] alphabets (or [http://www.biojava.org/docs/api14/org/biojava/bio/symbol/Symbol.html Symbols] from those alphabets) are instantiated at different times are equal via both the .equals() and == functions. Also Symbols from the PROTEIN and the PROTEIN-TERM alphabets are canonical as are Symbols from the [http://www.biojava.org/docs/api14/org/biojava/bio/symbol/IntegerAlphabet.html IntegerAlphabet] and the [http://www.biojava.org/docs/api14/org/biojava/bio/symbol/IntegerAlphabet.SubIntegerAlphabet.html SubIntegerAlphabet].
+In Biojava the same [http://www.biojava.org/docs/api1.8/org/biojava/bio/symbol/Alphabet.html Alphabets] and the same [http://www.biojava.org/docs/api1.8/org/biojava/bio/symbol/Symbol.html Symbols] are canonical no matter how they were constructed or where they came from. This means that if two [[wp:DNA|DNA]] alphabets (or [http://www.biojava.org/docs/api1.8/org/biojava/bio/symbol/Symbol.html Symbols] from those alphabets) are instantiated at different times are equal via both the .equals() and == functions. Also Symbols from the PROTEIN and the PROTEIN-TERM alphabets are canonical as are Symbols from the [http://www.biojava.org/docs/api1.8/org/biojava/bio/symbol/IntegerAlphabet.html IntegerAlphabet] and the [http://www.biojava.org/docs/api1.8/org/biojava/bio/symbol/IntegerAlphabet.SubIntegerAlphabet.html SubIntegerAlphabet].
 
-This is even true of [http://www.biojava.org/docs/api14/org/biojava/bio/symbol/Alphabet.html Alphabets] and [http://www.biojava.org/docs/api14/org/biojava/bio/symbol/Symbol.html Symbols] on different virtual machines (thanks to some [http://java.sun.com/j2se/1.4.2/docs/api/java/io/Serializable.html Serialization] magic) which means BioJava works across RMI.
+This is even true of [http://www.biojava.org/docs/api1.8/org/biojava/bio/symbol/Alphabet.html Alphabets] and [http://www.biojava.org/docs/api1.8/org/biojava/bio/symbol/Symbol.html Symbols] on different virtual machines (thanks to some [http://java.sun.com/j2se/1.4.2/docs/api/java/io/Serializable.html Serialization] magic) which means BioJava works across RMI.
 
 
 <java>
