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lines changed Original file line number Diff line number Diff line change @@ -73,7 +73,9 @@ public class NCBIQBlastServiceTest {
7373` */ `
7474` public static void main(String[] args) { `
7575
76- ` NCBIQBlastOutputProperties rof; `
76+ ` NCBIQBlastService rbw; `
77+ ` NCBIQBlastAlignmentProperties rqb; `
78+ ` NCBIQBlastOutputProperties rof; `
7779` InputStream is; `
7880` ArrayList ` <String >` rid = new ArrayList ` <String >` (); `
7981` String request = ""; `
@@ -87,9 +89,8 @@ public class NCBIQBlastServiceTest {
8789` * You would imagine that one would blast a bunch of sequences of `
8890` * identical nature with identical parameters... `
8991` */ `
90- ` NCBIQBlastService rbw = new NCBIQBlastService(); `
91-
92- ` NCBIQBlastAlignmentProperties rqb = new NCBIQBlastAlignmentProperties(); `
92+ ` rbw = new NCBIQBlastService(); `
93+ ` rqb = new NCBIQBlastAlignmentProperties(); `
9394
9495` rqb.setBlastProgram("blastp"); `
9596` rqb.setBlastDatabase("nr"); `
Original file line number Diff line number Diff line change @@ -44,7 +44,9 @@ public class NCBIQBlastServiceTest {
4444 */
4545 public static void main(String[] args) {
4646
47- NCBIQBlastOutputProperties rof;
47+ NCBIQBlastService rbw;
48+ NCBIQBlastAlignmentProperties rqb;
49+ NCBIQBlastOutputProperties rof;
4850 InputStream is;
4951 ArrayList<String> rid = new ArrayList<String>();
5052 String request = "";
@@ -58,9 +60,8 @@ public class NCBIQBlastServiceTest {
5860 * You would imagine that one would blast a bunch of sequences of
5961 * identical nature with identical parameters...
6062 */
61- NCBIQBlastService rbw = new NCBIQBlastService();
62-
63- NCBIQBlastAlignmentProperties rqb = new NCBIQBlastAlignmentProperties();
63+ rbw = new NCBIQBlastService();
64+ rqb = new NCBIQBlastAlignmentProperties();
6465
6566 rqb.setBlastProgram("blastp");
6667 rqb.setBlastDatabase("nr");
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