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_wikis/BioJava:CookBook3:NCBIQBlastService.md

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@@ -73,7 +73,9 @@ public class NCBIQBlastServiceTest {
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`    */`
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`   public static void main(String[] args) {`
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`       NCBIQBlastOutputProperties rof;`
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`       NCBIQBlastService rbw;`
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`               NCBIQBlastAlignmentProperties rqb;`
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`               NCBIQBlastOutputProperties rof;`
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`       InputStream is;`
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`       ArrayList`<String>` rid = new ArrayList`<String>`();`
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`       String request = "";`
@@ -87,9 +89,8 @@ public class NCBIQBlastServiceTest {
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`            * You would imagine that one would blast a bunch of sequences of`
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`            * identical nature with identical parameters...`
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`            */`
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`           NCBIQBlastService rbw = new NCBIQBlastService();`
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`           NCBIQBlastAlignmentProperties rqb = new NCBIQBlastAlignmentProperties();`
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`           rbw = new NCBIQBlastService();`
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`           rqb = new NCBIQBlastAlignmentProperties();`
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`           rqb.setBlastProgram("blastp");`
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`           rqb.setBlastDatabase("nr");`

_wikis/BioJava:CookBook3:NCBIQBlastService.mediawiki

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@@ -44,7 +44,9 @@ public class NCBIQBlastServiceTest {
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*/
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public static void main(String[] args) {
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NCBIQBlastOutputProperties rof;
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NCBIQBlastService rbw;
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NCBIQBlastAlignmentProperties rqb;
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NCBIQBlastOutputProperties rof;
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InputStream is;
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ArrayList<String> rid = new ArrayList<String>();
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String request = "";
@@ -58,9 +60,8 @@ public class NCBIQBlastServiceTest {
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* You would imagine that one would blast a bunch of sequences of
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* identical nature with identical parameters...
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*/
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NCBIQBlastService rbw = new NCBIQBlastService();
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NCBIQBlastAlignmentProperties rqb = new NCBIQBlastAlignmentProperties();
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rbw = new NCBIQBlastService();
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rqb = new NCBIQBlastAlignmentProperties();
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rqb.setBlastProgram("blastp");
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rqb.setBlastDatabase("nr");

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