#855 code cleaning not related to issue#873

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paolopavan wants to merge 48 commits intobiojava:masterfrom

paolopavan:#855-code-cleaning-not-related-to-issue

Commits on Apr 25, 2020

Added sequence file mentioned in #855
paolopavan
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Added basic integration test to demonstrate the issue
paolopavan
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retrieve information of circular sequence
paolopavan
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Propagate down this bit of information
paolopavan
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Need to extract also the sequence length to correctly create two locations spanning sequence end.
paolopavan
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Need to propagate down also this bit of information. Since two parameters more may be less readable I changed strategy and configured parser class.
paolopavan
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Implementation of exceptional complex location in case of location spanning the end point. Location contract wants sublocations
paolopavan
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Modified the exception to take in account this particular case
paolopavan
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Commits on Apr 27, 2020

Commits on Apr 28, 2020

deep substitution of implementations with interfaces
paolopavan
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Commits on Apr 30, 2020

Commits on May 1, 2020

Commits on May 4, 2020

wasn't aware of this and no other...
paolopavan
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