Skip to content

assembly subunit ordering in MMTF files #770

@pwrose

Description

@pwrose

Issue copied from: rcsb/mmtf#30

The ordering of assembly subunits seems to be different in MMTF and mmCIF files. This was reported on the pymol-users mailing list (https://sourceforge.net/p/pymol/mailman/message/36005513/).

I'm not aware that assembly ordering would be part of any spec, so technically there is nothing wrong here. But for consistency, it would be nice to provide identical assembly descriptions. In PyMOL, assemblies from mmCIF files are identical to pdb1 files, so I assume we're reading the mmCIF files correct.

Example: Assembly ordering for 3bw1:
mmCIF: 1 2 3 4
MMTF: 4 2 1 3

Metadata

Metadata

Assignees

Labels

bugBugs and bugfixes

Type

No type

Projects

No projects

Milestone

No milestone

Relationships

None yet

Development

No branches or pull requests

Issue actions