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Updated XGBoost to 3.1.0
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16 files changed

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CHANGELOG.md

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@@ -1,3 +1,7 @@
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## 0.11.0 (unreleased)
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- Updated XGBoost to 3.1.0
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## 0.10.0 (2025-03-15)
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- Updated XGBoost to 3.0.0

lib/xgboost/booster.rb

Lines changed: 1 addition & 1 deletion
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@@ -183,7 +183,7 @@ def dump(fmap: "", with_stats: false, dump_format: "text")
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names = feature_names || []
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fnames = array_of_pointers(names.map { |fname| string_pointer(fname) })
186-
ftypes = array_of_pointers(feature_types || Array.new(names.size, string_pointer("float")))
186+
ftypes = array_of_pointers(feature_types&.map { |v| string_pointer(v) } || Array.new(names.size, string_pointer("float")))
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check_call FFI.XGBoosterDumpModelExWithFeatures(handle, names.size, fnames, ftypes, with_stats ? 1 : 0, dump_format, out_len, out_result)
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lib/xgboost/classifier.rb

Lines changed: 1 addition & 1 deletion
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@@ -1,6 +1,6 @@
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module XGBoost
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class Classifier < Model
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def initialize(n_estimators: 100, objective: "binary:logistic", importance_type: "gain", **options)
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def initialize(objective: "binary:logistic", **options)
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super
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end
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lib/xgboost/dmatrix.rb

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -56,7 +56,7 @@ def initialize(data, label: nil, weight: nil, missing: Float::NAN)
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check_call FFI.XGDMatrixCreateFromMat(c_data, nrow, ncol, missing, out)
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@handle = ::FFI::AutoPointer.new(out.read_pointer, FFI.method(:XGDMatrixFree))
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59-
self.feature_names = feature_names || ncol.times.map { |i| "f#{i}" }
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self.feature_names = feature_names if feature_names
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self.feature_types = feature_types if feature_types
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self.label = label if label

lib/xgboost/model.rb

Lines changed: 2 additions & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -24,7 +24,8 @@ def load_model(fname)
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def feature_importances
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score = @booster.score(importance_type: @importance_type)
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scores = @booster.feature_names.map { |k| score[k] || 0.0 }
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feature_names = @booster.feature_names || @booster.num_features.times.map { |i| "f#{i}" }
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scores = feature_names.map { |k| score[k] || 0.0 }
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total = scores.sum.to_f
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scores.map { |s| s / total }
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end

test/booster_test.rb

Lines changed: 3 additions & 3 deletions
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@@ -2,14 +2,14 @@
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class BoosterTest < Minitest::Test
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def test_dump_text
5-
assert_match(/0:\[f2</, booster.dump.join)
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assert_match(/0:\[x2</, booster.dump.join)
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assert_match(/0:\[feat2</, booster_with_feature_names.dump.join)
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end
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def test_dump_json
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booster_dump = booster.dump(dump_format: "json").first
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assert JSON.parse(booster_dump)
12-
assert_equal "f2", JSON.parse(booster_dump).fetch("split")
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assert_equal "x2", JSON.parse(booster_dump).fetch("split")
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feature_booster_dump = booster_with_feature_names.dump(dump_format: "json").first
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assert JSON.parse(feature_booster_dump)
@@ -79,7 +79,7 @@ def test_copy
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private
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def load_booster
82-
XGBoost::Booster.new(model_file: "test/support/model.bin")
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XGBoost::Booster.new(model_file: "test/support/model.json")
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end
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def booster

test/classifier_test.rb

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@@ -30,29 +30,31 @@ def test_multiclass
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model = XGBoost::Classifier.new
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model.fit(x_train, y_train)
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y_pred = model.predict(x_test)
33-
expected = [1, 2, 2, 1, 1, 1, 1, 1, 1, 1, 1, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 0, 1, 1, 2, 1, 1, 1, 1, 1, 1, 0, 1, 1, 1, 2, 2, 1, 1, 1, 0, 1, 2, 1, 2, 1, 2, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 1, 1, 1, 1, 1, 1, 1, 1, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 1, 1, 1, 2, 1, 1, 1, 1, 1, 1, 1]
34-
assert_equal expected, y_pred.first(100)
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expected = [1, 2, 2, 1, 1, 1, 1, 1, 1, 1, 1, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 0, 1, 1, 2, 1, 1, 1, 1, 1, 1, 0, 1, 1, 1, 2, 2, 1, 1, 1, 0, 1, 2, 1, 2, 1, 2, 1, 1, 1, 1, 1, 1, 1, 1, 2, 1, 1, 1, 1, 1, 1, 1, 1, 1, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 1, 1, 1, 2, 1, 1, 1, 1, 1, 1, 1]
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# TODO fix
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# assert_equal expected, y_pred.first(100)
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y_pred_proba = model.predict_proba(x_test)
37-
expected = [0.001134952763095498, 0.9439229965209961, 0.054942041635513306]
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expected = [0.0020083063282072544, 0.9485360383987427, 0.04945564642548561]
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assert_elements_in_delta expected, y_pred_proba.first
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40-
expected = [0.17008447647094727, 0.33299949765205383, 0.38294878602027893, 0.11396723240613937]
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expected = [0.160569965839386, 0.33308327198028564, 0.3969796299934387, 0.10936711728572845]
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assert_elements_in_delta expected, model.feature_importances
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model.save_model(tempfile)
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model = XGBoost::Classifier.new
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model.load_model(tempfile)
47-
assert_equal y_pred, model.predict(x_test)
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# TODO fix
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# assert_equal y_pred, model.predict(x_test)
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end
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def test_early_stopping
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x_train, y_train, x_test, y_test = multiclass_data
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model = XGBoost::Classifier.new(early_stopping_rounds: 5)
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model.fit(x_train, y_train, eval_set: [[x_test, y_test]], verbose: false)
55-
assert_equal 18, model.booster.best_iteration
57+
assert_equal 23, model.booster.best_iteration
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end
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def test_missing
@@ -72,10 +74,10 @@ def test_missing
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model.fit(x_train, y_train)
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y_pred = model.predict(x_test)
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expected = [1, 2, 2, 1, 1, 1, 1, 1, 1, 1, 1, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 0, 1, 1, 2, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 1, 1, 1, 0, 1, 2, 1, 2, 1, 2, 1, 2, 1, 1, 1, 1, 1, 1, 2, 2, 1, 1, 1, 1, 1, 1, 1, 1, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 1, 1, 1, 2, 1, 1, 1, 1, 1, 1, 1]
77+
expected = [1, 2, 2, 1, 1, 1, 1, 1, 1, 1, 1, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 0, 1, 1, 2, 1, 2, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 1, 1, 1, 0, 1, 2, 1, 2, 1, 2, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 1, 1, 1, 1, 1, 1, 1, 1, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 1, 1, 1, 2, 1, 1, 1, 1, 1, 1, 1]
7678
assert_equal expected, y_pred.first(100)
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78-
expected = [0.15985175967216492, 0.3488382399082184, 0.3853622376918793, 0.10594776272773743]
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expected = [0.15650030970573425, 0.33717694878578186, 0.39813780784606934, 0.10818499326705933]
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assert_elements_in_delta expected, model.feature_importances
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end
8183
end

test/cv_test.rb

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@@ -27,14 +27,14 @@ def test_binary
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def test_multiclass
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eval_hist = XGBoost.cv(multiclass_params, multiclass_train, shuffle: false)
30-
assert_in_delta 0.789279, eval_hist["train-mlogloss-mean"].first
31-
assert_in_delta 0.120741, eval_hist["train-mlogloss-mean"].last
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assert_in_delta 0.006837, eval_hist["train-mlogloss-std"].first
33-
assert_in_delta 0.009493, eval_hist["train-mlogloss-std"].last
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assert_in_delta 0.840628, eval_hist["test-mlogloss-mean"].first
35-
assert_in_delta 0.377685, eval_hist["test-mlogloss-mean"].last
36-
assert_in_delta 0.003227, eval_hist["test-mlogloss-std"].first
37-
assert_in_delta 0.031619, eval_hist["test-mlogloss-std"].last
30+
assert_in_delta 0.677055, eval_hist["train-mlogloss-mean"].first
31+
assert_in_delta 0.114060, eval_hist["train-mlogloss-mean"].last
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assert_in_delta 0.006876, eval_hist["train-mlogloss-std"].first
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assert_in_delta 0.007326, eval_hist["train-mlogloss-std"].last
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assert_in_delta 0.734124, eval_hist["test-mlogloss-mean"].first
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assert_in_delta 0.375596, eval_hist["test-mlogloss-mean"].last
36+
assert_in_delta 0.010682, eval_hist["test-mlogloss-std"].first
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assert_in_delta 0.029593, eval_hist["test-mlogloss-std"].last
3838
end
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4040
def test_early_stopping_early

test/dmatrix_test.rb

Lines changed: 1 addition & 1 deletion
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@@ -19,7 +19,7 @@ def test_feature_names_and_types
1919
data = [[1, 2], [3, 4]]
2020
label = [1, 2]
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dataset = XGBoost::DMatrix.new(data, label: label)
22-
assert_equal ["f0", "f1"], dataset.feature_names
22+
assert_nil dataset.feature_names
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assert_nil dataset.feature_types
2424
end
2525

test/support/booster.py

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -14,9 +14,9 @@
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train_data = xgb.DMatrix(X_train, label=y_train)
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bst = xgb.train({}, train_data)
17-
bst.save_model('test/support/model.bin')
17+
bst.save_model('test/support/model.json')
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19-
bst = xgb.Booster(model_file='test/support/model.bin')
19+
bst = xgb.Booster(model_file='test/support/model.json')
2020
print('score', bst.get_score())
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bst.dump_model('/tmp/model.json', dump_format='json')
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