Open
Conversation
fxwiegand
requested changes
Dec 12, 2024
Collaborator
fxwiegand
left a comment
fxwiegand
left a comment
There was a problem hiding this comment.
Thx a lot! See comment in code.
resources/plot.vl.json
Outdated
Comment on lines
250
to
251
| "condition":{"test": "(datum.flags & 1024) > 0", | ||
| "value": "#8A2BE2"}, |
Collaborator
There was a problem hiding this comment.
Nice that seems to work! Great idea using the mapq border for the duplicate indication. Would be great if you could format the json file. Can be easily done using jpf -f resources/plot.vl.json. Install via conda install jpf.
Bumps [tokio](https://github.com/tokio-rs/tokio) from 1.42.0 to 1.43.0. - [Release notes](https://github.com/tokio-rs/tokio/releases) - [Commits](tokio-rs/tokio@tokio-1.42.0...tokio-1.43.0) --- updated-dependencies: - dependency-name: tokio dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Bumps [rust-htslib](https://github.com/rust-bio/rust-htslib) from 0.48.0 to 0.49.0. - [Release notes](https://github.com/rust-bio/rust-htslib/releases) - [Changelog](https://github.com/rust-bio/rust-htslib/blob/master/CHANGELOG.md) - [Commits](rust-bio/rust-htslib@v0.48.0...v0.49.0) --- updated-dependencies: - dependency-name: rust-htslib dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: Felix Wiegand <fxwiegand@wgdnet.de>
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
2 participants
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Visualizes reads that are PCR or optical duplicates via violet bars.