forked from InsightSoftwareConsortium/ITK
-
Notifications
You must be signed in to change notification settings - Fork 0
Expand file tree
/
Copy pathImageSpatialObject.cxx
More file actions
150 lines (130 loc) · 4.86 KB
/
Copy pathImageSpatialObject.cxx
File metadata and controls
150 lines (130 loc) · 4.86 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
/*=========================================================================
*
* Copyright NumFOCUS
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* https://www.apache.org/licenses/LICENSE-2.0.txt
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*
*=========================================================================*/
// Software Guide : BeginLatex
//
// \index{itk::ImageSpatialObject}
//
// An \itkref{ImageSpatialObject} contains an \itkref{Image} but adds the
// notion of spatial transformations and parent-child hierarchy. Let's begin
// the next example by including the appropriate header file.
//
// Software Guide : EndLatex
#include "itkImageRegionIterator.h"
// Software Guide : BeginCodeSnippet
#include "itkImageSpatialObject.h"
// Software Guide : EndCodeSnippet
int
main(int, char *[])
{
// Software Guide : BeginLatex
//
// We first create a simple 2D image of size 10 by 10 pixels.
//
// Software Guide : EndLatex
// Software Guide : BeginCodeSnippet
using Image = itk::Image<short, 2>;
auto image = Image::New();
constexpr Image::SizeType size = { { 10, 10 } };
Image::RegionType region;
region.SetSize(size);
image->SetRegions(region);
image->Allocate();
// Software Guide : EndCodeSnippet
// Software Guide : BeginLatex
//
// Next we fill the image with increasing values.
//
// Software Guide : EndLatex
// Software Guide : BeginCodeSnippet
using Iterator = itk::ImageRegionIterator<Image>;
Iterator it(image, region);
short pixelValue = 0;
for (it.GoToBegin(); !it.IsAtEnd(); ++it, ++pixelValue)
{
it.Set(pixelValue);
}
// Software Guide : EndCodeSnippet
// Software Guide : BeginLatex
//
// We can now define the \code{ImageSpatialObject} which is templated over
// the dimension and the pixel type of the image.
//
// Software Guide : EndLatex
// Software Guide : BeginCodeSnippet
using ImageSpatialObject = itk::ImageSpatialObject<2, short>;
auto imageSO = ImageSpatialObject::New();
// Software Guide : EndCodeSnippet
// Software Guide : BeginLatex
//
// Then we set the itkImage to the \code{ImageSpatialObject} by using the
// \code{SetImage()} function.
//
// Software Guide : EndLatex
// Software Guide : BeginCodeSnippet
imageSO->SetImage(image);
imageSO->Update();
// Software Guide : EndCodeSnippet
// Software Guide : BeginLatex
//
// At this point we can use \code{IsInsideInWorldSpace()},
// \code{IsInsideInObjectSpace()}, \code{ValueAtInWorldSpace()},
// \code{ValueAtInObjectSpace()}, \code{DerivativeAtInWorldSpace()},
// and \code{DerivativeAtInObjectSpace()} functions inherent in
// SpatialObjects. The \code{IsInsideInWorldSpace()} value can be
// particularly useful when dealing with registration.
//
// Software Guide : EndLatex
// Software Guide : BeginCodeSnippet
using Point = itk::Point<double, 2>;
auto insidePoint = itk::MakeFilled<Point>(9);
if (imageSO->IsInsideInWorldSpace(insidePoint))
{
std::cout << insidePoint << " is inside the image." << std::endl;
}
// Software Guide : EndCodeSnippet
// Software Guide : BeginLatex
//
// The \code{ValueAtInWorldSpace()} returns the value of the closest pixel,
// i.e no interpolation, to a given physical point.
//
// Software Guide : EndLatex
// Software Guide : BeginCodeSnippet
double returnedValue;
imageSO->ValueAtInWorldSpace(insidePoint, returnedValue);
std::cout << "ValueAt(" << insidePoint << ") = " << returnedValue
<< std::endl;
// Software Guide : EndCodeSnippet
// Software Guide : BeginLatex
//
// The derivative at a specified position in space can be computed using
// the \code{DerivativeAtInWorldSpace()} function. The first argument is
// the point in physical coordinates where we are evaluating the
// derivatives. The second argument is the order of the derivation, and the
// third argument is the result expressed as a \itkref{Vector}.
// Derivatives are computed iteratively using finite differences and, like
// the \code{ValueAtInWorldSpace()}, no interpolator is used.
//
// Software Guide : EndLatex
// Software Guide : BeginCodeSnippet
ImageSpatialObject::DerivativeVectorType returnedDerivative;
imageSO->DerivativeAtInWorldSpace(insidePoint, 1, returnedDerivative);
std::cout << "First derivative at " << insidePoint;
std::cout << " = " << returnedDerivative << std::endl;
// Software Guide : EndCodeSnippet
return EXIT_SUCCESS;
}