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Commits on Feb 18, 2017

• [maven-release-plugin]prepare release biojava-4.2.6

  

  Jenkins

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• Catching empty coordinates earlier in quat sym detection

  josemduarte

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Commits on Feb 15, 2017

• Merge pull request #634 from sbliven/bugfixes-4.2

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  sbliven

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• Fix Quaternary symmetry symmetry detection bug

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  sbliven

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Commits on Feb 10, 2017

• Better rules for Quaternary symm self-alignments

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  sbliven

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Commits on Jan 21, 2017

• Now catching empty arrays in getCentroid

  josemduarte

  committed
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• Less verbose logging in AsaCalculator

  josemduarte

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• Better logging in symmetry package

  josemduarte

  committed
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• Fix for #631

  josemduarte

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• New test to demonstrate issue with cloning

  josemduarte

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Commits on Dec 7, 2016

• [maven-release-plugin]prepare for next development iteration

  

  Jenkins

  committed
  2a6ff38

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• [maven-release-plugin]prepare release biojava-4.2.5

  

  Jenkins

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• Merge pull request #612 from andreasprlic/bugfixes-4.2

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  josemduarte

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Commits on Nov 30, 2016

• addressing requested changes re. throwing exceptions.

  andreasprlic

  committed
  4c6c348

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• moving to Java 7

  andreasprlic

  committed
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• now also accepting old header line

  andreasprlic

  committed
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• #610 switching test to junit version 4

  andreasprlic

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Commits on Nov 29, 2016

• creating local dir, if it does not exist.

  andreasprlic

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• fix for #610

  andreasprlic

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Commits on Nov 23, 2016

• Adding non-standard sg check to pdb parser

  josemduarte

  committed
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• Fixed bug: NPE for CrystalBuilder on 4hhb. Moved TestCrystalBuilder to integrationtest.

  josemduarte

  committed
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• Now using the new fields from CrystalBuilder

  josemduarte

  committed
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Commits on Nov 22, 2016

• Some extra rare fields in atom_sites

  josemduarte

  committed
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• Fixing npe introduced in last commit

  josemduarte

  committed
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• Implementing new crystallographic metadata fields.

  josemduarte

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• Implementing parsing of atom_sites category in mmcif parser/consumer

  josemduarte

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Commits on Nov 9, 2016

• Merge pull request #599 from sbliven/fix596-4.2

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• Fix #596. Remove test for GenBank identifier parsing

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Commits on Sep 21, 2016

• Inserts space when altLoc is null, so that the rest of fields are properly aligned.

  

  altaite

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  josemduarte

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• FileConvert fix - added empty space if altLoc is null.

  

  altaite

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  josemduarte

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Commits on Sep 3, 2016

• More tests for issue #355

  

  andviane

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  josemduarte

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• Pulling in the @josemduarte test case for issue #355

  

  andviane

  authored and

  josemduarte

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• Cleanup

  

  andviane

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  josemduarte

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• Fix 355

  

  andviane

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  josemduarte

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Commits on Aug 30, 2016

• Fix compilation error after cherry-pick

  sbliven

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