You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Copy file name to clipboardExpand all lines: README.md
+4-5Lines changed: 4 additions & 5 deletions
Display the source diff
Display the rich diff
Original file line number
Diff line number
Diff line change
@@ -16,9 +16,8 @@ This repository contains an example of using DESeq2 in Python for differential g
16
16
17
17
## Introduction
18
18
19
-
[DESeq2](https://bioconductor.org/packages/release/bioc/html/DESeq2.html) is a widely used tool for differential gene expression (DGE) analysis in RNA-SEQ data. And it is mainly implemented in [R](https://cran.r-project.org/).
20
-
However, you can use [rpy2](https://pypi.org/project/rpy2/), a Python library that allows you to run R code.
21
-
19
+
[DESeq2](https://bioconductor.org/packages/release/bioc/html/DESeq2.html) is a widely used tool for differential gene expression (DGE) analysis in RNA-Seq data, and it is mainly implemented in [R](https://cran.r-project.org/).
20
+
However, you can use [rpy2](https://pypi.org/project/rpy2/), a Python library that allows you to run R code. If you're interested in learning more about RNA-seq analysis, I highly recommend visiting [RNA-seqlopedia](https://rnaseq.uoregon.edu/). This comprehensive resource provides valuable insights into RNA-seq, covering everything from basic concepts to advanced techniques. It's an excellent starting point for anyone looking to deepen their understanding of RNA-seq analysis.
22
21
## Installation
23
22
24
23
To run the DESeq2 example in Python, Ensure you have installed `R` on your system, and install the required packages. Follow these steps:
@@ -70,13 +69,13 @@ To run the DESeq2 analysis, follow these steps:
If you would like to contribute to this project, please fork the repository and submit a pull request. For major changes, please open an issue to discuss what you would like to change.
77
76
78
77
## Contact
79
-
Thanks for visiting this repository! If you have any questions or feedback, feel free to contact me at [Gmail](ptlsugam@gmail.com).
78
+
Thanks for visiting this repository! If you have any questions or feedback, feel free to contact me at [ptlsugam@gmail.com].
80
79
81
80
## Acknowledgements
82
81
Thank you for visiting this repository. Your feedback and contributions are greatly appreciated. Feel free to reach out if you have any suggestions for improvements or new features.
0 commit comments