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Commits on Jan 21, 2026

• ontology: Remove EDHAA2

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Commits on Jan 16, 2026

• Inherit orgainzation from parent project

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• Rename group ID to ca.ubc.msl.pavlab

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Commits on Sep 15, 2025

• Inherit more versions from pavlab-starter-parent

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Commits on Sep 13, 2025

• Inherit versions for Apache Commons from pavlab-starter-parent

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Commits on Sep 10, 2025

• Properly link to colt API in javadocs

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Commits on Sep 3, 2025

• Fix nullable annotation usages and missing unwrap implementation

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Commits on Aug 31, 2025

• Bump version for development

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• Merge tag '1.1.29' into development

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• Update to hotfix version

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• Merge branch 'hotfix-1.1.29'

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• Update for next development version

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• ontology: Only hash the URI of resources

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• Add OntologyStatement and remove unused classes

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Commits on Aug 29, 2025

• Relocate and move Gemma's simple ontology implementation under ubic.basecode.ontology.simple

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• Update versions for hotfix

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Commits on Aug 28, 2025

• Replace com.github.fommil.netlib with dev.ludovic.netlib (fix #43)

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Commits on Aug 26, 2025

• Revert "Make Jena and Lucene optional"

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• Drop log4j-api dependency for tests

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• Make Jena and Lucene optional

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  9dc6378

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• Remove jfreechart

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• Bump version for development

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  8b61b23

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• Merge tag '1.1.28' into development

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• Update to hotfix version

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• Merge branch 'hotfix-1.1.28'

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• Update for next development version

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• Cleanup for the linear model

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• Update versions for hotfix

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Commits on Aug 25, 2025

• Update version for development

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• Merge tag '1.1.27' into development

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• Update to hotfix version

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• Merge branch 'hotfix-1.1.27'

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• Update for next development version

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• Fix R dataframe test

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• Exclude native org.rosuda.REngine from depcheck

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