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update docs, add manifest.in, conda env
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MANIFEST.in

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include license
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include environment.yml
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graft notebooks

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docs/build/html/.buildinfo

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# Sphinx build info version 1
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# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
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config: 3de3d9b3633f7e1b6ff0a4d823402522
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config: 7780509472e0ef8e45a4e9c93bce38c7
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docs/build/html/_modules/index.html

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