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Pull requests: MultiQC/MultiQC

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Pull requests list

Fix merging tables when outputting wide parquets core: merging runs
#3528 opened Apr 11, 2026 by jchorl Contributor Loading… v1.36
1
14
do not require importlib_metadata backport on recent Python core: software-packaging
#3508 opened Mar 14, 2026 by a-detiste Contributor Loading… v1.36
1
Add PR report preview workflow with Netlify deployment
#3494 opened Feb 21, 2026 by ewels Member Loading…
5
Update methurator module
#3479 opened Jan 30, 2026 by edogiuili Loading…
4
claude/switch-to-ty-checker-7Ve9I
#3468 opened Jan 13, 2026 by ewels Member Loading…
2
[nonpareil][adapter removal] Add missing anchors
#3429 opened Dec 9, 2025 by fgvieira Contributor Loading…
1 task done
2
Add SAV (Sequencing Analysis Viewer) module
#3425 opened Dec 8, 2025 by pinin4fjords Contributor • Draft
2 of 4 tasks
1
1
Add toggle to display line graphs as heatmaps core: front end WIP Work in progress
#3424 opened Dec 8, 2025 by ewels Member • Draft
1
2
Refactor bbtools module to follow MultiQC conventions module: change
#3410 opened Dec 3, 2025 by ewels Member Loading…
2
New Module : wittyer (a tool for benchmarking structural variant (SV) calls against a truth set)
#3408 opened Dec 2, 2025 by georgiakes Loading…
7 of 8 tasks
1
4
[fastqc] switch adapter content plot into several subplots module: change waiting: response Waiting for more information from user
#3407 opened Dec 2, 2025 by fgvieira Contributor Loading…
1 task done
8
feat: migrate to uv for faster dependency management
#3388 opened Nov 14, 2025 by edmundmiller Contributor • Draft
feat: Add Claude Code skills system for automated module development
#3378 opened Oct 28, 2025 by edmundmiller Contributor • Draft
Add support for umi_tools whitelist and count commands
#3326 opened Sep 2, 2025 by edmundmiller Contributor • Draft
1
Add automated module generation system
#3325 opened Sep 2, 2025 by edmundmiller Contributor • Draft
9
adding fgbio/CollectDuplexSeqMetrics.py waiting: changes Issue / PR is on hold, waiting for requested changes
#3286 opened Jul 30, 2025 by carmelinacharalambous Loading…
6 tasks
4
modifying picard/hsmetrics.py add target coverage
#3285 opened Jul 30, 2025 by carmelinacharalambous Loading…
6 tasks
2
New module: LongReadSum
#3284 opened Jul 29, 2025 by jonperdomo Loading…
8 tasks done
7
Add support for MEAN_ORIGINAL_QUALITY in Picard MeanQualityByCycle module: enhancement
#3232 opened Jun 11, 2025 by carmelinacharalambous Loading…
6 tasks
3
New module: 10x flex cellranger output protocol module: new
#3226 opened Jun 9, 2025 by asiamustafah955 Loading…
6 tasks done
3
Add test snapshots
#3213 opened May 30, 2025 by edmundmiller Contributor Loading…
New module: bamUtil (clipOverlap only) module: new waiting: response Waiting for more information from user
#3203 opened May 21, 2025 by edmundmiller Contributor Loading…
2 of 8 tasks
15
Fastqe WIP Work in progress
#2945 opened Oct 31, 2024 by edmundmiller Contributor • Draft
8 tasks
2
CellRanger: Support for CellRanger Multi module: enhancement
#2861 opened Sep 17, 2024 by sxpl-DavidSchmidt Contributor Loading…
7 tasks done
15
New module: metaDMG module: new WIP Work in progress
#2221 opened Dec 12, 2023 by fgvieira Contributor • Draft
9 of 10 tasks
3
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