args=("$@")

NUMBER_OF_ARGS=6

if [ $# -ne ${NUMBER_OF_ARGS} ]; then

echo "Not enough args ! "

echo "Mandatory: please give DELAY WITH_CLUSTER INPUT_PATH HBF_PER_TF RAWDATA_FILENAME RAWDATA_EXT"

echo "as in the example below :"

echo "./run_decoding_workflow.sh 0.001 0 /home/mft/data/ 128 data-2021_03_10__18_23_15__-20551-4 .raw"

exit 1

DELAY_S=${args[0]}

WITH_CLUSTER=${args[1]}

INPUT_PATH=${args[2]}

HBF_PER_TF=${args[3]}

RAWDATA_FILENAME=${args[4]}

RAWDATA_EXT=${args[5]}

CFGFILE=MFTraw.cfg

touch ${CFGFILE}

echo "[input-MFT-0]">>${CFGFILE}

echo "dataOrigin = MFT" >>${CFGFILE}

echo "dataDescription = RAWDATA" >>${CFGFILE}

echo "filePath = "${INPUT_PATH}"/"${RAWDATA_FILENAME}${RAWDATA_EXT} >> ${CFGFILE}

echo "Creation of "${CFGFILE}" : Done! "

echo "-----------------------------"

cat ${CFGFILE}

echo "-----------------------------"

START_TIME=$(date +"%Y/%m/%d %H:%M:%S")

echo "Start "${START_TIME}

echo "Using --delay = "${DELAY_S}

echo "Run decoder RDHv6 on : "${INPUT_PATH}"/"${RAWDATA_FILENAME}${RAWDATA_EXT}

timestamp=$(date +"%Y_%m_%d_%H_%M_%S")

mkdir -pv ${INPUT_PATH}/log/

mkdir -pv ${INPUT_PATH}/digits/

log=${INPUT_PATH}/log/decoder-${RAWDATA_FILENAME}-$timestamp.out

ROOTFILE=${INPUT_PATH}/digits/${RAWDATA_FILENAME}.root

N_THREAD=4

DECODER_VERBOSITY=0 # can be set to 1 for more verbosity

CLUSTERISE_OPTION="--no-clusters --no-cluster-patterns" # no clustering

SHOW_EXECUTED_COMMAND=0 # echo the O2 workflow command that will be executed

if [ "${WITH_CLUSTER}" -eq "1" ]; then

CLUSTERISE_OPTION=""

echo "CLUSTERISE_OPTION = "${CLUSTERISE_OPTION}

if [ "${HBF_PER_TF}" -eq "256" ]; then

if [ "${SHOW_EXECUTED_COMMAND}" -eq "1" ]; then

echo "o2-raw-file-reader-workflow -b --delay "${DELAY_S}" --nocheck-missing-stop --nocheck-starts-with-tf --nocheck-packet-increment --nocheck-hbf-jump --nocheck-hbf-per-tf --detect-tf0 --input-conf "${CFGFILE}" | o2-itsmft-stf-decoder-workflow -b --nthreads "${N_THREAD}" --runmft --digits "${CLUSTERISE_OPTION}" --decoder-verbosity "${DECODER_VERBOSITY}" | o2-itsmft-digit-writer-workflow -b --runmft --disable-mc --outfile "${ROOTFILE}" > "${log}

fi

o2-raw-file-reader-workflow -b --delay ${DELAY_S} --nocheck-missing-stop --nocheck-starts-with-tf --nocheck-packet-increment --nocheck-hbf-jump --nocheck-hbf-per-tf --detect-tf0 --input-conf ${CFGFILE} | o2-itsmft-stf-decoder-workflow -b --nthreads ${N_THREAD} --runmft --digits ${CLUSTERISE_OPTION} --decoder-verbosity ${DECODER_VERBOSITY} | o2-itsmft-digit-writer-workflow -b --runmft --disable-mc --outfile ${ROOTFILE} > ${log}

echo "Using HBFUtils.nHBFPerTF = "${HBF_PER_TF}

if [ "${SHOW_EXECUTED_COMMAND}" -eq "1" ]; then

echo "o2-raw-file-reader-workflow -b --delay "${DELAY_S}" --nocheck-missing-stop --nocheck-starts-with-tf --nocheck-packet-increment --nocheck-hbf-jump --nocheck-hbf-per-tf --detect-tf0 --configKeyValues \"HBFUtils.nHBFPerTF="${HBF_PER_TF}"\" --input-conf "${CFGFILE}" | o2-itsmft-stf-decoder-workflow -b --nthreads "${N_THREAD}" --runmft --digits "${CLUSTERISE_OPTION}" --decoder-verbosity "${DECODER_VERBOSITY}" | o2-itsmft-digit-writer-workflow -b --runmft --disable-mc --outfile "${ROOTFILE}" > "${log}

fi

o2-raw-file-reader-workflow -b --delay ${DELAY_S} --nocheck-missing-stop --nocheck-starts-with-tf --nocheck-packet-increment --nocheck-hbf-jump --nocheck-hbf-per-tf --detect-tf0 --configKeyValues "HBFUtils.nHBFPerTF=${HBF_PER_TF}" --input-conf ${CFGFILE} | o2-itsmft-stf-decoder-workflow -b --nthreads ${N_THREAD} --runmft --digits ${CLUSTERISE_OPTION} --decoder-verbosity ${DECODER_VERBOSITY} | o2-itsmft-digit-writer-workflow -b --runmft --disable-mc --outfile ${ROOTFILE} > ${log}

rm -f ${CFGFILE}

echo "Log in : " ${log}

echo "Digits in : " ${ROOTFILE}

echo "[ERROR]"

grep "ERROR" ${log} | wc -l

echo "Error Jump in RDH_packetCounter : "

grep "Jump in RDH_packetCounter" ${log} | wc -l

echo "[ERROR] Failed to open input file"

grep "Failed to open input file" ${log} | wc -l

echo "[ERROR] Mismatch between flagged and calculated new TF start"

grep "Mismatch between flagged and calculated new TF start" ${log} | grep "ERROR" | wc -l

echo "[ERROR] Unknown word"

grep "Unknown word" ${log} | grep "ERROR" | wc -l

echo "[ERROR] Wrong RDH.pageCnt increment"

grep "Wrong RDH.pageCnt increment" ${log} | grep "ERROR" | wc -l

echo "[ERROR] Unexpected RDH version"

grep "Unexpected RDH version" ${log} | grep "ERROR" | wc -l

echo "[ERROR] ahead of the reference"

grep "is ahead of the reference" ${log} | grep "ERROR" | wc -l

echo "[ERROR] No SOX found"

grep "No SOX found" ${log} | grep "ERROR" | wc -l

echo "[ERROR] Number of TFs is less than expected"

grep "Number of TFs is less than expected" ${log} | grep "ERROR" | wc -l

grep "Unhandled std::exception" ${log}

grep "device shutting down" ${log}

echo "[ERROR] SEVERE"

grep "SEVERE" ${log} | wc -l

STOP_TIME=$(date +"%Y %m %d %H:%M:%S")

echo "Stop " ${STOP_TIME}

echo "Done !"

echo "-----------------------------"