GenbankWriter increments the start position of each location. For some

stefanharjes · stefanharjes · commit 021bf4e81bca · 2015-02-14T11:44:04.000+13:00
reason there is an increment added in GenericInsdcHeaderFormat which is
responsible for this effect. Changing the increment to 0 patches the
writer.
diff --git a/biojava-core/src/main/java/org/biojava/nbio/core/sequence/io/GenericInsdcHeaderFormat.java b/biojava-core/src/main/java/org/biojava/nbio/core/sequence/io/GenericInsdcHeaderFormat.java
@@ -281,7 +281,7 @@ private String _insdc_location_string_ignoring_strand_and_subfeatures(
 			}
 		} else {
 			//Typical case, e.g. 12..15 gets mapped to 11:15
-			return ref + _insdc_feature_position_string(sequenceLocation.getStart(), 1) + ".." + _insdc_feature_position_string(sequenceLocation.getEnd());
+			return ref + _insdc_feature_position_string(sequenceLocation.getStart(), 0) + ".." + _insdc_feature_position_string(sequenceLocation.getEnd());
 		}
 	}
 	private String _insdc_feature_position_string(Point location) {

Original file line number	Diff line number	Diff line change
`@@ -281,7 +281,7 @@ private String _insdc_location_string_ignoring_strand_and_subfeatures(`
`281`	`281`	`}`
`282`	`282`	`} else {`
`283`	`283`	`//Typical case, e.g. 12..15 gets mapped to 11:15`
`284`		`- return ref + _insdc_feature_position_string(sequenceLocation.getStart(), 1) + ".." + _insdc_feature_position_string(sequenceLocation.getEnd());`
	`284`	`+ return ref + _insdc_feature_position_string(sequenceLocation.getStart(), 0) + ".." + _insdc_feature_position_string(sequenceLocation.getEnd());`
`285`	`285`	`}`
`286`	`286`	`}`
`287`	`287`	`private String _insdc_feature_position_string(Point location) {`