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Do not unpickle unit test data with pandas #2373

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Merged
jeylau merged 1 commit into from
Sep 12, 2023
Merged

Do not unpickle unit test data with pandas #2373

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17 changes: 13 additions & 4 deletions tests/test_crossvalutils.py
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Original file line number Diff line number Diff line change
Expand Up @@ -9,7 +9,7 @@
# Licensed under GNU Lesser General Public License v3.0
#
import numpy as np
import pandas as pd
import pickle
from deeplabcut.pose_estimation_tensorflow.lib import crossvalutils


Expand Down Expand Up @@ -98,10 +98,14 @@ def test_benchmark_paf_graphs_montblanc(evaluation_data_and_metadata_montblanc):
[BEST_GRAPH_MONTBLANC],
split_inds=[metadata["data"]["trainIndices"], metadata["data"]["testIndices"]],
)
results_gt = pd.read_pickle("tests/data/montblanc_map.pickle")
with open("tests/data/montblanc_map.pickle", "rb") as f:
results_gt = pickle.load(f)
np.testing.assert_equal(
results[1].loc["purity"].to_numpy().squeeze(),
results_gt[0].loc["purity", 6].to_numpy(),
[
results_gt[0][6][('purity', 'mean')],
results_gt[0][6][('purity', 'std')],
],
)
vals = [
results[2][0][0]["mAP"],
Expand All @@ -111,5 +115,10 @@ def test_benchmark_paf_graphs_montblanc(evaluation_data_and_metadata_montblanc):
]
np.testing.assert_equal(
vals,
results_gt[0].iloc[-4:, -1].to_numpy(),
[
results_gt[0][6][('mAP_train', 'mean')],
results_gt[0][6][('mAR_train', 'mean')],
results_gt[0][6][('mAP_test', 'mean')],
results_gt[0][6][('mAR_test', 'mean')],
],
)