FlyBase Aberration Report: Dmel\Df(3R)P9

General Information

Symbol

Df(3R)P9

Species

D. melanogaster

Name

Pasadena 9

FlyBase ID

FBab0002632

Feature type

chromosomal_deletion

Also Known As

DfP9, Df(3)P9, Df-P9, Df P9

Computed Breakpoints include

89E1;89E5

Features within 89E1--89E5

Sequence coordinates

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

Mutagen

X ray

(Lewis, 1980)

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

(Price et al., 1997, Castelli-Gair et al., 1990, Gonzalez et al., 1989, Dura et al., 1985, Duncan, 1982, Kerridge and Dura, 1982, Lewis, 1980)

Breakpoints

89E1;89E4-89E5

(Gonzalez et al., 1989, Dura et al., 1985, Duncan, 1982, Lewis, 1980)

89E1-89E2;89E3-89E5

(Kerridge and Dura, 1982)

89E1;89E5

(Sato and Denell, 1985)

89D9-89E1;89E4-89E5

(Price et al., 1997, Castelli-Gair et al., 1990)

Causes alleles

Carries alleles

Transposon Insertions

Formalized genetic data

Fas1 << bk1 << l(3)89Ea << l(3)89Ee << bk2 << l(3)89En

Genetic mapping information

Comments

Breakpoint(s) molecularly mapped

(Zinn et al., 1988, Karch et al., 1985)

Right breakpoint 225-230 kb to the right of the right breakpoint of In(3R)Cbx^rv1 (Karch, Weiffenbach, Peifer, Bender, Duncan, Celniker, Crosby and Lewis, 1985, Cell 43: 81-96).

Comments on Cytology

Ref: FBrf0020044.

(Castelli-Gair et al., 1990)

Ref: FBrf0032262.

(Sato and Denell, 1985)

Left limit of break 1 from polytene analysis (FBrf0034411) Right limit of break 1 from inclusion of l(3)89Ea (FBrf0043252) Left limit of break 2 from polytene analysis (FBrf0042382) Right limit of break 2 from polytene analysis (FBrf0034411)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

abd-A

(Maurel-Zaffran et al., 1999, Azpiazu and Morata, 1998, Greig and Akam, 1995, Frayne and Sato, 1991, Zink et al., 1991, Castelli-Gair et al., 1990, Gonzalez-Reyes and Morata, 1990, Micol et al., 1990, Boulet and Scott, 1988, Jurgens, 1988, Rowe and Akam, 1988, Tiong et al., 1988, Dura et al., 1985, Jurgens, 1985, Karch et al., 1985, Tiong et al., 1985)

Abd-B

(Maurel-Zaffran et al., 1999, Azpiazu and Morata, 1998, Greig and Akam, 1995, Frayne and Sato, 1991, Zink et al., 1991, Castelli-Gair et al., 1990, Gonzalez-Reyes and Morata, 1990, Micol et al., 1990, Celniker et al., 1989, Boulet and Scott, 1988, Jurgens, 1988, Rowe and Akam, 1988, Tiong et al., 1988, Dura et al., 1985, Jurgens, 1985, Tiong et al., 1985, Kuhn et al., 1984)

l(3)89Ea

(Sanchez-Herrero, 1996.3.7, Tiong et al., 1985)

l(3)89Ee

(Tiong et al., 1985)

Ubx

(Maurel-Zaffran et al., 1999, Azpiazu and Morata, 1998, Greig and Akam, 1995, LaJeunesse and Shearn, 1995, Frayne and Sato, 1991, Zink et al., 1991, Castelli-Gair et al., 1990, Gonzalez-Reyes and Morata, 1990, Micol et al., 1990, Boulet and Scott, 1988, Jurgens, 1988, Rowe and Akam, 1988, Tiong et al., 1988, Dura et al., 1985, Jurgens, 1985, Tiong et al., 1985)

Partially deleted / disrupted

Molecular Data

Completely deleted

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

CSN5

(Sanchez-Herrero, 1996.3.7)

E(Egfr)C12

(Price et al., 1997)

l(3)89Ba

(Tiong et al., 1985)

l(3)89Bb

(Tiong et al., 1985)

l(3)89Bc

(Tiong et al., 1985)

l(3)89Bd

(Tiong et al., 1985)

l(3)89Be

(Tiong et al., 1985)

l(3)89Bf

(Tiong et al., 1985)

l(3)89Bg

(Tiong et al., 1985)

l(3)89Bh

(Tiong et al., 1985)

l(3)89Bi

(Tiong et al., 1985)

l(3)89Bj

(Tiong et al., 1985)

l(3)89Bk

(Tiong et al., 1985)

l(3)89Bl

(Tiong et al., 1985)

l(3)89Bm

(Sanchez-Herrero, 1996.3.7)

l(3)89Bn

(Sanchez-Herrero, 1996.3.7)

l(3)89Bu

(Sanchez-Herrero, 1998.8.30)

l(3)89Ca

(Tiong et al., 1985)

l(3)89Cb

(Tiong et al., 1985)

l(3)89Cc

(Tiong et al., 1985)

l(3)89Cd

(Tiong et al., 1985)

l(3)89Ce

(Sanchez-Herrero, 1996.3.7)

l(3)89Cg

(Sanchez-Herrero, 1998.8.30)

l(3)89Ch

(Sanchez-Herrero, 1998.8.30)

l(3)89Ci

(Sanchez-Herrero, 1998.8.30)

l(3)89Da

(Tiong et al., 1985)

l(3)89Db

(Tiong et al., 1985)

l(3)89Dc

(Tiong et al., 1985)

l(3)89Dd

(Sanchez-Herrero, 1998.8.30)

l(3)89De

(Sanchez-Herrero, 1998.8.30)

l(3)89Df

(Sanchez-Herrero, 1998.8.30)

l(3)89Ef

(Tiong et al., 1985)

l(3)89Eg

(Tiong et al., 1985)

l(3)89Eh

(Tiong et al., 1985)

l(3)89Ei

(Tiong et al., 1985)

l(3)89Ek

(Sanchez-Herrero, 1996.3.7)

l(3)89El

(Sanchez-Herrero, 1996.3.7)

l(3)89Em

(Sanchez-Herrero, 1998.8.30)

l(3)89En

(Sanchez-Herrero, 1998.8.30)

lup-2

(Piergentili et al., 2004)

(Tiong et al., 1985)

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location (0)

If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
In these cases, there will be no "Export to Hitlist" button to the left.

Related Comments

May uncover Abd-B.

(Kuhn and Woods, 1982)

Phenotypic Data

In combination with other aberrations

Dp(3;1)P68/Df(3R)P9 flies have reduced nerve terminal arborisation onto muscles compared to wild-type. Type 2 and type 1 terminals are affected. The excitatory junctional currents of muscle fibre 12 are increased in amplitude compared to wild-type.

(Zhong and Shanley, 1995)

Df(3R)P5/Df(3R)P9 heterozygotes lack Abd-B expression in the epidermis and ventral nerve cord.

(Sanchez-Herrero, 1991)

Increases the frequency of the trx bithorax-variegated phenotype in heterozygous combination with Df(3R)red-P52.

(Castelli-Gair and Garcia-Bellido, 1990)

Germ line clonal analysis shows that the combination Df(3R)P9/Df(3R)Ubx109 lacks germ line functions necessary for normal egg production. The combination Dp(3;3)bxd¹⁰⁰ Df(3R)Ubx109/Df(3R)P9 is viable in germ line clones.

(Kerridge and Dura, 1982)

NOT in combination with other aberrations

Heterozygotes show a very weak transformation of haltere to wing, as indicated by an increase in haltere size and the development of a few wing-type marginal bristles. Heterozygous males show reduced pigmentation of segment A5 (indicating a weak transformation to A4), a few bristles develop in the A6 sternite (indicating weak transformation to A5) and A7 develops a tiny tergite (indicating a weak transformation to A6).

(Kankel et al., 2004)

Used to show that Ubx represses trichomes in the proximal naked cuticle of the posterior second femur in a dosage dependent manner.

(Stern, 1998)

Thoracic and abdominal segments are transformed to parasegment 4 identity.

(Kuhn et al., 1995)

Haplo-insufficient phenotype is enhanced by heterozygosity for ash2¹⁸.

(LaJeunesse and Shearn, 1995)

Ectopic Scr expression causes T1 beard formation in thoracic segments 1 to 3 and abdominal segments 1 to 8 and ectopic salivary glands formation in parasegments 0, 1 and 14.

(Andrew et al., 1994)

Defective in gonad assembly.

(Warrior, 1994)

Homozygous embryos fail to retract the germ band correctly. The spiracles, leg discs and wing/haltere discs are reiterated in the 'abdominal region'.

(Bate and Martinez Arias, 1991)

When in combination with salm mutations embryos exhibit transformation of parasegment 14 and 15 to modified thoracic parasegments resembling transformed parasegment 13 of Df(3R)P9 embryos.

(Jurgens, 1988)

The A1 transformation phenotype of ftz^Ual alleles is slightly suppressed in Df(3R)P9 / ftz^Ual allele heterozygotes. The haltere to wing transformation phenotype of ftz^Rpl is enhanced in Df(3R)P9 / ftz^Rpl heterozygotes.

(Duncan, 1986)

Adult abdominal segments 2-8 partially transformed into copies of the first (Morata, J. Embrol. Exp. Morphol. 78: 319-341).

(Karch et al., 1985)

Enhances the frequency of transformation of the fourth abdominal tergite to fifth abdominal tergite seen in Pcl¹/Pcl⁴ flies.

(Duncan, 1982)

Germ line clonal analysis shows that the haploinsufficient female sterility of Df(3R)P9 is a somatic defect.

(Kerridge and Dura, 1982)

Heterozygotes with Ubx^bx-4 exhibit weak bx-like effects.

(Lewis, 1980)

Homozygotes die in late embryonic or early larval stages, showing transformation of metathorax and anterior first abdominal segment to mesothorax (Lewis, 1978; Hayes, Sato and Denell, 1984, Proc. Nat. Acad. Sci. USA 81: 545-49) and transformation of posterior meso- and metathorax to prothorax (Hayes et al., 1984; Ganger, Fehon and Schubiger, 1985, Nature 313: 395-97). When incubated at 18^o, homozygous Df(3R)P9 embryos do not complete germ band shortening but Df(3R)P9/Dp(3;3)P5 heterozygotes go through normal development (Ganger and Schubiger, 1984, D. I. S. 60: 108-09). Df(3R)P9/+ flies show reduced male pigmentation on AB5 and AB6, are sterile and have deformed genitalia; Df(3R)P9/Mcp flies are partially fertile. Df(3R)P9/Df(3R)Ubx109 larvae have a short tracheal trunk between AB7 and AB8 and a posterior spiracle in AB8 (Lewis, 1978).

Stocks (6)

Bloomington

3670

Dp(3;1)P115; Df(3R)P9, st¹ in¹ kni^ri-1 Pc³ Antp²¹ Ki¹ p^p/MKRS

Kyoto

101614

Df(3R)P9 / Dp(3;3)P5

107168

Dp(3;1)P115; Df(3R)P9, st¹ in¹ kni^ri-1 Pc³ Scr² p^p/TM3, Sb¹

107171

Dp(3;1)P115; Df(3R)P9, st¹ in¹ kni^ri-1 Pc³ Scr⁴ red¹/TM3, Sb¹

107167

Dp(3;1)P115; Df(3R)P9, st¹ in¹ kni^ri-1 Pc³ Scr⁴ Antp²⁵/TM3, Sb¹

107166

Dp(3;1)P115; Df(3R)P9, st¹ in¹ kni^ri-1 Pc³ Antp²¹ Ki¹ p^p/TM3, Sb¹

Notes on Origin

Discoverer

E.B. Lewis.

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

Does not interact with the RpII140^wimp maternal effect.

(Parkhurst and Ish-Horowicz, 1991)

Synonyms and Secondary IDs (9)

Reported As

Symbol Synonym

DFp9

(Celniker et al., 1989)

Df P9

(Sambrani et al., 2013, Capdevila and Garcia-Bellido, 1981)

Df(3)P9

(Zhong and Shanley, 1995, Chen et al., 1992)

Df(3R)P9

(Chauvet et al., 2000)

Df(P9)

(Maeda et al., 2018)

Df-P9

(Kuhn et al., 1995, Kuhn and Woods, 1982)

DfP9

(Gummalla et al., 2012, Duncan and Montgomery, 2002, Estrada et al., 2002, Wicker-Thomas and Jallon, 2001, Sanchez-Herrero, 1996.3.7, Camprodon and Castelli-Gair, 1994, Frayne and Sato, 1991, Castelli-Gair and Garcia-Bellido, 1990, Macias et al., 1990, Bienz and Tremml, 1988, de Lorenzi et al., 1988, Casanova et al., 1985, Sanchez-Herrero et al., 1985, Sato and Denell, 1985, Struhl and White, 1985)

(Jurgens, 1985)

Name Synonyms

Pasadena 9

(Lewis, 1980)

Secondary FlyBase IDs

References (100)

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