FlyBase Aberration Report: Dmel\Df(2L)VA13

General Information

Symbol

Df(2L)VA13

Species

D. melanogaster

Name

FlyBase ID

FBab0001666

Feature type

chromosomal_deletion

Computed Breakpoints include

37C2-37C5;38C2-38D1

Features within 37C2--38D1

Sequence coordinates

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

Mutagen

gamma ray

(Stathakis et al., 1995, Wright et al., 1981)

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

(Stathakis et al., 1995, Whalen and Wilson, 1986, Gilbert et al., 1984, Wright et al., 1981)

Breakpoints

37C1-37D1;38C1-38D2

(Wright et al., 1981)

37C1-37C5;38C1-38D2

(Whalen and Wilson, 1986, Gilbert et al., 1984)

37C2-37C5;38C2-38D1

(Stathakis et al., 1995)

Causes alleles

Carries alleles

Transposon Insertions

Formalized genetic data

l(2)37Cg << bk1 << brat << pr << bk2

Genetic mapping information

Comments

Breakpoint(s) molecularly mapped

(Gilbert et al., 1984)

Ddc DNA coordinates from Gilbert, Hirsh and Wright, 1984, Genetics 106: 679-84: Distal breakpoint between +30.8 and +35 kb

Comments on Cytology

Left limit of break 1 from polytene analysis (FBrf0084402) Right limit of break 1 from polytene analysis (FBrf0040975) Limits of break 2 from polytene analysis (FBrf0084402)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

brat

(Wright, 1996, Gilbert et al., 1984, Wright et al., 1981)

(Wright et al., 1981)

γTub37C

(Wright, 1996)

Partially deleted / disrupted

Molecular Data

Completely deleted

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

Acn

(Wright, 1996, Gilbert et al., 1984, Wright et al., 1981)

AcpC

(Whalen and Wilson, 1986)

amd

(Wright, 1996, Gilbert et al., 1984, Wright et al., 1981)

AsnRS

(Wright, 1996, Wright et al., 1981)

Catsup

(Wright, 1996, Gilbert et al., 1984, Wright et al., 1981)

cub

(Wright, 1996, Gilbert et al., 1984)

DCTN6-p27

(Wright, 1996, Wright et al., 1981)

Ddc

(Wright, 1996, Gilbert et al., 1984, Wright et al., 1981)

Dox-3

(Rizki et al., 1985)

hook

(Wright, 1996, Gilbert et al., 1984, Wright et al., 1981)

l(2)37Bb

(Wright, 1996, Gilbert et al., 1984, Wright et al., 1981)

l(2)37Cb

(Wright, 1996, Wright et al., 1981)

l(2)37Cd

(Wright, 1996, Wright et al., 1981)

Lim3

(Wright, 1996, Gilbert et al., 1984, Wright et al., 1981)

mib2

(Wright, 1996, Gilbert et al., 1984)

Phb1

(Wright, 1996, Wright et al., 1981)

Polr1D

(Wright, 1996)

Rpn3

(Wright, 1996, Gilbert et al., 1984)

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location (0)

If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
In these cases, there will be no "Export to Hitlist" button to the left.

Related Comments

Phenotypic Data

In combination with other aberrations

NOT in combination with other aberrations

Stocks (0)

Notes on Origin

Discoverer

Bishop.

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

37C2-37C5 breakpoint is between position +31.7 and +36.4 on the Ddc map relative to the HpaI restriction site near the 3' end of Ddc.

(Stathakis et al., 1995)

Synonyms and Secondary IDs (2)

Reported As

Symbol Synonym

Df(2L)VA13

VA13

(Rizki et al., 1985)

Name Synonyms

Secondary FlyBase IDs

References (8)

Report Sections

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