FlyBase Aberration Report: Dmel\Df(2L)Sco[rv25]

General Information

Symbol

Df(2L)Sco^rv25

Species

D. melanogaster

Name

Deficiency (2L) Scutoid

FlyBase ID

FBab0001552

Feature type

chromosomal_deletion

Also Known As

Df(2L)Scorv25, Sco^R+25, Df(2L)ScoR+25

Computed Breakpoints include

35D1;35D2-35D5

Features within 35D1--35D5

Sequence coordinates

Member of large scale dataset(s)

Nature of Aberration

Cytological Order

Progenitor

Tp(2;2)Sco

(Roote et al., 1996, Ashburner et al., 1983)

Mutagen

X ray

(Grau et al., 1984)

Class of aberration (relative to wild type)

chromosomal_deletion

(FlyBase, 2007)

Class of aberration (relative to progenitor)

chromosomal_deletion

Breakpoints

Causes alleles

Carries alleles

Transposon Insertions

Formalized genetic data

wor << bk1 << sna << lace << bk2 << CycE

Genetic mapping information

Comments

Comments on Cytology

Cytology like Tp(2;2)Sco.

(Roote et al., 1996)

Cytologically similar to Tp(2;2)Sco.

(Ashburner et al., 1983)

Left limit of break 1 from polytene analysis (citation unavailable) Right limit of break 1 from inclusion of sna (FBrf0039455) Left limit of break 2 from inclusion of lace (FBrf0039455) Right limit of break 2 from non-inclusion of CycE (FBrf0039455)

Sequence Crossreferences

DDBJ / EMBL / GenBank

DNA sequence

Protein sequence

Gene Deletion and Duplication Data

Genes Deleted / Disrupted

Complementation Data

Completely deleted / disrupted

lace

(Dubin et al., 1995, Ashburner et al., 1990, Grau et al., 1984, Ashburner et al., 1983)

noc

(Grau et al., 1984, Ashburner et al., 1983)

sna

(Dubin et al., 1995, Ashburner et al., 1990, Grau et al., 1984, Ashburner et al., 1983)

Partially deleted / disrupted

noc

(Roote et al., 1996)

Molecular Data

Completely deleted

Partially deleted

Genes NOT Deleted / Disrupted

Complementation Data

Adh

(Grau et al., 1984, Ashburner et al., 1983)

BicC

(Ashburner et al., 1990, Grau et al., 1984)

cact

(Ashburner et al., 1990)

Ca-α1D

(Ashburner et al., 1990)

chif

(Ashburner et al., 1990)

(Ashburner et al., 1990, Grau et al., 1984)

cni

(Ashburner et al., 1990)

crp

(Ashburner et al., 1990)

Cul3

(Ashburner et al., 1990, Ashburner et al., 1983)

CycE

(Ashburner et al., 1990, Grau et al., 1984, Ashburner et al., 1983)

Cyp303a1

(Ashburner et al., 1990)

dac

(Ashburner et al., 1990)

elA

(Grau et al., 1984, Ashburner et al., 1983)

elB

(Grau et al., 1984)

esg

(Ashburner et al., 1990)

fzy

(Ashburner et al., 1990)

Gli

(Ashburner et al., 1990)

heix

(Ashburner et al., 1990)

l(2)35De

(Ashburner et al., 1990)

l(2)36Aa

(Ashburner et al., 1990)

l(2)36Ab

(Ashburner et al., 1990)

l(2)36Ac

(Ashburner et al., 1990)

l(2)36Ad

(Ashburner et al., 1990)

mol

(Grau et al., 1984, Ashburner et al., 1983)

mRpL4

(Ashburner et al., 1990)

ms(2)35Eb

(Ashburner et al., 1990)

Mtr4

(Ashburner et al., 1990)

ND-B17

(Ashburner et al., 1990)

osp

(Grau et al., 1984, Ashburner et al., 1983)

Pburs

(Grau et al., 1984, Ashburner et al., 1983)

plo

(Ashburner et al., 1990)

PolD3

(Ashburner et al., 1990, Grau et al., 1984, Ashburner et al., 1983)

stc

(Ashburner et al., 1990, Grau et al., 1984, Ashburner et al., 1983)

Su(H)

(Ashburner et al., 1990, Grau et al., 1984)

Syx5

(Ashburner et al., 1990)

TfIIS

(Ashburner et al., 1990)

Uxt

(Ashburner et al., 1990)

vas

(Ashburner et al., 1990)

wek

(Ashburner et al., 1990)

wor

(Ashburner et al., 1990, Grau et al., 1984, Ashburner et al., 1983)

Molecular Data

Genes Duplicated

Complementation Data

Completely duplicated

Partially duplicated

Molecular Data

Completely duplicated

Partially duplicated

Genes NOT Duplicated

Complementation Data

Molecular Data

Affected Genes Inferred by Location (0)

If no genes are listed here, it may be because the affected region is very large. The JBrowse insert above may show an error for the same reason, and other FlyBase tools such as CytoSearch may also fail for large regions. You can contact FlyBase for more help.
In these cases, there will be no "Export to Hitlist" button to the left.

Related Comments

Phenotypic Data

In combination with other aberrations

Lethal in combination with Df(2L)el20. Inferred to overlap with: Df(2L)el20.

(Ashburner et al., 1999)

NOT in combination with other aberrations

Unusual noc complementation data due to function of the two transcripts, nocA and nocB.

(Roote et al., 1996)

Lethal with ethyl methanesulfonate induced lethal alleles of sna.

(McGill et al., 1988)

Stocks (2)

6086

108600

Notes on Origin

Discoverer

Ashburner.

Revertant

Balancer / Genotype Variants of the Aberration

Separable Components

Other Comments

Synonyms and Secondary IDs (8)

Reported As

Symbol Synonym

Df(2L)Sco25

Df(2L)Sco^R+25

(Grau et al., 1984)

Df(2L)Sco^R+

Df(2L)Sco^rv25

Df(2L)ScoR+25

(Ashburner et al., 1990, McGill et al., 1988)

Df(2L)Scorv25

(Ashburner et al., 1999, Roote et al., 1996)

Sco^R+25

(Ashburner and Harrington, 1984, Ashburner et al., 1983)

Name Synonyms

Deficiency (2L) Scutoid

Secondary FlyBase IDs

References (11)

Report Sections

Open Close