annotate roundup/backends/indexer_sqlite_fts.py @ 6915:9ff091537f43

postgresql native-fts; more indexer tests 1) Make postgresql native-fts actually work. 2) Add simple stopword filtering to sqlite native-fts indexer. 3) Add more tests for indexer_common get_indexer Details: 1) roundup/backends/indexer_postgresql_fts.py: ignore ValueError raised if we try to index a string with a null character in it. This could happen due to an incorrect text/ mime type on a file that has nulls in it. Replace ValueError raised by postgresql with customized IndexerQueryError if a search string has a null in it. roundup/backends/rdbms_common.py: Make postgresql native-fts work. When specified it was using using whatever was returned from get_indexer(). However loading the native-fts indexer backend failed because there was no connection to the postgresql database when this call was made. Simple solution, move the call after the open_connection call in Database::__init__(). However the open_connection call creates the schema for the database if it is not there. The schema builds tables for indexer=native type indexing. As part of the build it looks at the indexer to see the min/max size of the indexed tokens. No indexer define, we get a crash. So it's a a chicken/egg issue. I solved it by setting the indexer to the Indexer from indexer_common which has the min/max token size info. I also added a no-op save_indexer to this Indexer class. I claim save_indexer() isn't needed as a commit() on the db does all the saving required. Then after open_connection is called, I call get_indexer to retrieve the correct indexer and indexer_postgresql_fts woks since the conn connection property is defined. roundup/backends/indexer_common.py: add save_index() method for indexer. It does nothing but is needed in rdbms backends during schema initialization. 2) roundup/backends/indexer_sqlite_fts.py: when this indexer is used, the indexer test in DBTest on the word "the" fail. This is due to missing stopword filtering. Implement basic stopword filtering for bare stopwords (like 'the') to make the test pass. Note: this indexer is not currently automatically run by the CI suite, it was found during manual testing. However there is a FIXME to extract the indexer tests from DBTest and run it using this backend. roundup/configuration.py, roundup/doc/admin_guide.txt: update doc on stopword use for sqlite native-fts. test/db_test_base.py: DBTest::testStringBinary creates a file with nulls in it. It was breaking postgresql with native-fts indexer. Changed test to assign mime type application/octet-stream that prevents it from being processed by any text search indexer. add test to exclude indexer searching in specific props. This code path was untested before. test/test_indexer.py: add test to call find with no words. Untested code path. add test to index and find a string with a null \x00 byte. it was tested inadvertently by testStringBinary but this makes it explicit and moves it to indexer testing. (one version each for: generic, postgresql and mysql) Renamed Get_IndexerAutoSelectTest to Get_IndexerTest and renamed autoselect tests to include autoselect. Added tests for an invalid indexer and using native-fts with anydbm (unsupported combo) to make sure the code does something useful if the validation in configuration.py is broken. test/test_liveserver.py: add test to load an issue add test using text search (fts) to find the issue add tests to find issue using postgresql native-fts test/test_postgresql.py, test/test_sqlite.py: added explanation on how to setup integration test using native-fts. added code to clean up test environment if native-fts test is run.
author John Rouillard <rouilj@ieee.org>
date Mon, 05 Sep 2022 16:25:20 -0400
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1 """ This implements the full-text indexer using fts5 in sqlite.
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2 The table consists of (Class, propname, itemid) instances as columns
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3 along with a textblob column. The textblob column is searched using
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4 MATCH and the instances returned.
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5
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6 sqlite test commands to manage schema version change required by
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7 this update.
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8
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9 -- check length before and after
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10 select length(schema) from schema;
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11
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12 -- reset from version 7 (with fts index) to version 6
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13 update schema set schema = (select replace(schema,
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14 '''version'': 7','''version'': 6') as new_schema from schema);
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16 -- check version. Good thing it's at the front of the schema
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17 select substr(schema,0,15) from schema;
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18 {'version': 6,
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19 """
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20
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21 from roundup.backends.indexer_common import Indexer as IndexerBase
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22 from roundup.i18n import _
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23 from roundup.cgi.exceptions import IndexerQueryError
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24
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25 try:
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26 import sqlite3 as sqlite
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27 if sqlite.sqlite_version_info < (3, 9, 0):
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28 raise ValueError('sqlite minimum version for FTS5 is 3.9.0+ '
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29 '- %s found' % sqlite.sqlite_version)
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30 except ImportError:
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31 raise ValueError('Unable to import sqlite3 to support FTS.')
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33
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34 class Indexer(IndexerBase):
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35 def __init__(self, db):
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36 IndexerBase.__init__(self, db)
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37 self.db = db
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38 self.reindex = 0
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39 self.query_language = True
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40
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41 def close(self):
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42 """close the indexing database"""
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43 # just nuke the circular reference
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44 self.db = None
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45
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46 def save_index(self):
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47 """Save the changes to the index."""
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48 # not necessary - the RDBMS connection will handle this for us
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49 pass
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50
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51 def force_reindex(self):
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52 """Force a reindexing of the database. This essentially
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53 empties the __fts table and sets a flag so
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54 that the databases are reindexed"""
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55 self.reindex = 1
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56
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57 def should_reindex(self):
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58 """returns True if the indexes need to be rebuilt"""
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59 return self.reindex
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60
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61 def add_text(self, identifier, text, mime_type='text/plain'):
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62 """ "identifier" is (classname, itemid, property) """
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63 if mime_type != 'text/plain':
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64 return
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65
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66 # Ensure all elements of the identifier are strings 'cos the itemid
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67 # column is varchar even if item ids may be numbers elsewhere in the
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68 # code. ugh.
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69 identifier = tuple(map(str, identifier))
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70
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71 # removed pre-processing of text that incudes only words with:
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72 # self.minlength <= len(word) <= self.maxlength
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73 # Not sure if that is correct.
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74
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75 # first, find the rowid of the (classname, itemid, property)
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76 a = self.db.arg # arg is the token for positional parameters
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77 sql = 'select rowid from __fts where _class=%s and '\
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78 '_itemid=%s and _prop=%s' % (a, a, a)
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79 self.db.cursor.execute(sql, identifier)
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80 r = self.db.cursor.fetchone()
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81 if not r:
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82 # not previously indexed
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83 sql = 'insert into __fts (_class, _itemid, _prop, _textblob)'\
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84 ' values (%s, %s, %s, %s)' % (a, a, a, a)
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85 self.db.cursor.execute(sql, identifier + (text,))
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86 else:
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87 id = int(r[0])
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88 sql = 'update __fts set _textblob=%s where rowid=%s' % \
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89 (a, a)
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90 self.db.cursor.execute(sql, (text, id))
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91
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92 def find(self, wordlist):
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93 """look up all the words in the wordlist.
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94 For testing wordlist is actually a list.
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95 In production, wordlist is a list of a single string
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96 that is a sqlite MATCH query.
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97
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98 https://www.sqlite.org/fts5.html#full_text_query_syntax
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99 """
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100
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101 # Filter out stopwords. Other searches tokenize the user query
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102 # into an list of simple word tokens. For fTS, query
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103 # tokenization doesn't occur.
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104
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105 # A user's FTS query is a wordlist with one element. The
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106 # element is a string to parse and will probably not match a
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107 # stop word.
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108 #
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109 # However the generic indexer search tests pass in a list of
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110 # word tokens. We filter the word tokens so it behaves like
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111 # other backends. This means that a search for a simple word
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112 # like 'the' (without quotes) will return no hits, as the test
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113 # expects.
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114 wordlist = [w for w in wordlist if not self.is_stopword(w.upper())]
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115
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116 if not wordlist:
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117 return []
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118
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119 a = self.db.arg # arg is the token for positional parameters
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120
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121 # removed filtering of word in wordlist to include only
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122 # words with: self.minlength <= len(word) <= self.maxlength
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123
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124 sql = 'select _class, _itemid, _prop from __fts '\
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125 'where _textblob MATCH %s' % a
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126
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127 try:
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128 # tests supply a multi element word list. Join them.
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129 self.db.cursor.execute(sql, (" ".join(wordlist),))
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130 except sqlite.OperationalError as e:
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131 if 'no such column' in e.args[0]:
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132 raise IndexerQueryError(
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133 _("Search failed. Try quoting any terms that "
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134 "include a '-' and retry the search."))
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135 else:
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136 raise IndexerQueryError(e.args[0].replace("fts5:",
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137 "Query error:"))
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138
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139 return self.db.cursor.fetchall()

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