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test: benchmark no progress when INCI defined; set path; signal handling The progress reports on issue creation in the db breaks up the table in CI as each is reported on a new line. If the environment variable INCI is set to any value, don't generate progress output. Change GitHub action to define INCI Insert roundup root directory in sys.path so import from test directory will be found. Also set up signal handler to delete the database if ^C is pressed during creation. The interrupted db is incomplete (required data missing), but it is used as is for a subsequent run. This causes the benchmark to crash.
author John Rouillard <rouilj@ieee.org>
date Wed, 10 Apr 2024 12:54:18 -0400
parents 30fcdf60da44
children 3de80157606c
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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1 # merged in python-package.yml workflow
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2
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3 # reference docs:
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4 # https://blog.deepjyoti30.dev/tests-github-python
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5 # https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python
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6 # https://github.com/pypa/twine/blob/main/.github/workflows/main.yml
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7
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8 name: roundup-ci
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9
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10 on:
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11 push:
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12 # skip if github.ref is 'refs/heads/maint-1.6'
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13 # aka github.ref_name of 'maint-1.6'
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14 # see https://github.com/orgs/community/discussions/26253
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15 # for mechanism to control matrix based on branch
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16 branches: [ "*", '!maint-1.6' ]
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17 # pull_request:
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18 # branches: [ "master" ]
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19 schedule:
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20 # monthly build/check
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21 - cron: '23 17 1 * *'
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22 workflow_dispatch:
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23 inputs:
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24 debug_enabled:
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25 type: boolean
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26 description: 'Run the build with tmate debugging enabled (https://github.com/marketplace/actions/debugging-with-tmate)'
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27 required: false
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28 default: false
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29
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30 # GITHUB_TOKEN only has read repo context.
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31 permissions:
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32 contents: read
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33
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34 concurrency:
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35 group: ${{ github.workflow }}-${{ github.ref }}
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36 cancel-in-progress: true
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37
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38 jobs:
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39 test:
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40 name: CI build test
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41
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42 #runs-on: ubuntu-latest
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43 # use below if running on multiple OS's.
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44 runs-on: ${{ matrix.os }}
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45
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46 if: "!contains(github.event.head_commit.message, 'no-github-ci')"
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47
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48 strategy:
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49 fail-fast: false
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50 max-parallel: 4
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51 matrix:
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52 # Run in all these versions of Python
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53 python-version:
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54 # - "2.7"
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55 - "3.10"
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56 # - "3.9"
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57 - "3.8"
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58 # - "3.7"
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59 - "3.11"
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60
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61 # use for multiple os or ubuntu versions
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62 #os: [ubuntu-latest, macos-latest, windows-latest]
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63 # ubuntu latest 22.04 12/2022
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64 os: [ubuntu-latest, ubuntu-20.04]
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65
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66 # if the ones above fail. fail the build
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67 experimental: [ false ]
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68
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69 include:
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70 # example: if 3.12 fails the jobs still succeeds
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71 - python-version: 3.12
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72 os: ubuntu-22.04
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73 experimental: true
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74
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75 # 3.6 not available on new 22.04 runners, so run on 20.04 ubuntu
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76 - python-version: 3.6
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77 os: ubuntu-20.04
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78
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79 exclude:
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80 # skip all python versions on 20.04 except explicitly included
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81 - os: ubuntu-20.04
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82
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83 # run the finalizer for coveralls even if one or more
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84 # experimental matrix runs fail.
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85 # moving it above strategy produces unexpected value false
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86 # moving it below (here) produces unexpected value ''.
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87 # continue-on-error: ${{ matrix.experimental }}
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88
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89 env:
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90 # get colorized pytest output even without a controlling tty
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91 PYTEST_ADDOPTS: "--color=yes"
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92 # OS: ${{ matrix.os }}
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93 PYTHON_VERSION: ${{ matrix.python-version }}
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94
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95 steps:
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96 # Checkout the latest code from the repo
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97 - name: Checkout source
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98 # example directives:
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99 # disable step
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100 # if: {{ false }}
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101 # continue running if step fails
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102 # continue-on-error: true
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103 uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # v4.1.1
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104
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105 # Setup version of Python to use
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106 - name: Set Up Python ${{ matrix.python-version }}
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107 uses: actions/setup-python@0a5c61591373683505ea898e09a3ea4f39ef2b9c # v5.0.0
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108 with:
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109 python-version: ${{ matrix.python-version }}
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110 allow-prereleases: true
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111 cache: 'pip'
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112
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113 - name: Install build tools - setuptools
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114 run: pip install setuptools
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115
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116 # Display the Python version being used
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117 - name: Display Python and key module versions
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118 run: |
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119 python -c "import sys; print('python version: ', sys.version)"
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120 python -c "import sqlite3; print('sqlite version: ', sqlite3.sqlite_version)"
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121 python -c "import setuptools; print('setuptools version: ', setuptools.__version__);"
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122
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123 - name: Update pip
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124 run: python -m pip install --upgrade pip
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125
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126 # note pytest-env is not needed for redis password as there is
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127 # no password on CI's redis.
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128 - name: Install pytest and other packages needed for running tests
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129 run: pip install flake8 hypothesis mock pytest pytest-cov requests sphinx-tabs
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130
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131 # https://github.com/mxschmitt/action-tmate
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132 # allow remote ssh into the CI container. I need this to debug
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133 # some xfail cases
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134 - name: Setup tmate session
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135 uses: mxschmitt/action-tmate@v3
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136 if: ${{ github.event_name == 'workflow_dispatch' && inputs.debug_enabled }}
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137 timeout-minutes: 10
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138 with:
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139 limit-access-to-actor: true
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140
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141 - name: run flake8 - abort for syntax error, otherwise warn only
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142 run: |
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143 # stop the build for Python syntax errors or undefined names
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144 # talgettext is a utility function ignore it.
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145 flake8 roundup --count --select=E9,F63,F7,F82 --show-source --statistics --extend-exclude talgettext.py
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146 # exit-zero treats all errors as warnings.
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147 # The GitHub editor is 127 chars wide
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148 flake8 roundup --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
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149
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150 # Install the databases
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151 - name: Install mysql/mariadb
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152 run: |
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153 #set -xv
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154 # mysql is pre-installed and active but this is the install command
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155 # sudo apt-get install mysql-server mysql-client
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156 # set up mysql database
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157 sudo sed -i -e '/^\[mysqld\]/,/^\[mysql/s/^#* *max_allowed_packet.*/max_allowed_packet = 500M/' /etc/mysql/mysql.conf.d/mysqld.cnf; sleep 3
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158 #tail -n +0 /etc/mysql/my.cnf /etc/mysql/mysql.conf.d/mysqld.cnf
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159 #grep max_allowed /etc/mysql/mysql.conf.d/mysqld.cnf
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160 #ls /etc/mysql/conf.d/ /etc/mysql/mysql.conf.d/
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161 #sleep 5
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162 # try to improve performance speed by disabling some ACID
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163 # settings and change some layout defaults.
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164 sudo sed -i -e '$a\innodb_flush_log_at_trx_commit = 2' /etc/mysql/mysql.conf.d/mysqld.cnf
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165 sudo sed -i -e '$a\innodb_file_per_table = OFF' /etc/mysql/mysql.conf.d/mysqld.cnf
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166 sudo sed -i -e '$a\innodb_doublewrite=OFF' /etc/mysql/mysql.conf.d/mysqld.cnf
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167 sudo sed -i -e '$a\innodb_fast_shutdown=2' /etc/mysql/mysql.conf.d/mysqld.cnf
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168 sudo sed -i -e '$a\innodb_log_file_size=1048576' /etc/mysql/mysql.conf.d/mysqld.cnf
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169 sudo sed -i -e '$a\innodb_flush_method=O_DIRECT' /etc/mysql/mysql.conf.d/mysqld.cnf
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170 sudo sed -i -e '$a\innodb_log_buffer_size=3M' /etc/mysql/mysql.conf.d/mysqld.cnf
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171 sudo sed -i -e '$a\innodb_buffer_pool_size=180M' /etc/mysql/mysql.conf.d/mysqld.cnf
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172 sleep 3
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173 sudo service mysql restart
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174 #sleep 10
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175 #ps -ef | grep mysqld
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176 #sudo netstat -anp | grep mysqld
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177 sudo mysql -u root -proot -e 'CREATE USER "rounduptest"@"localhost" IDENTIFIED WITH mysql_native_password BY "rounduptest"; GRANT ALL on rounduptest.* TO "rounduptest"@"localhost";'
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178
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179 - name: Install postgres
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180 run: |
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181 sudo apt-get update && sudo apt-get install postgresql
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182 # Disable fsync, full page writes for speed,
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183 # don't care about data durability when testing
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184 sudo sed -i -e '$a\fsync = off' /etc/postgresql/*/*/postgresql.conf
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185 sudo sed -i -e '$a\full_page_writes = off' /etc/postgresql/*/*/postgresql.conf
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186 sudo sed -i -e '$a\synchronous_commit = off' /etc/postgresql/*/*/postgresql.conf
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187 sudo service postgresql restart; sleep 10
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188 # set up postgresql database
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189 sudo -u postgres psql -c "CREATE ROLE rounduptest WITH CREATEDB LOGIN PASSWORD 'rounduptest';" -U postgres
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3071db43bfb6 feat: issue2550852 - support using a specified PostgreSQL db schema
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parents: 7656
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190 sudo -u postgres psql -c "CREATE ROLE rounduptest_schema LOGIN PASSWORD 'rounduptest';" -U postgres
7721
d55427443443 chore: fix ci yaml formatting.
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191 sudo -u postgres psql -c "CREATE DATABASE rounduptest_schema;" -U postgres
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192 sudo -u postgres psql -c "GRANT CREATE ON DATABASE rounduptest_schema TO rounduptest_schema;" -U postgres
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193
6864
7e907d97deb6 redis, gpg, more myql debugging
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194 - name: install redis
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195 run: |
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196 sudo apt-get install redis
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197 pip install redis
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198
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199 - name: Install python db libraries
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200 run: pip install psycopg2 mysqlclient
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201
6865
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202 - name: Install auxiliary packages
6839
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203 run: |
6850
ce3f39195a68 updates and remove tab from yml.
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204 sudo apt-get install swig gpgsm libgpgme-dev
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205 # pygments for markdown2 to highlight code blocks
7509
46248c3ca7af markdown2 v2.4.9 is broken. Pin to 2.4.8 or earlier.
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206 pip install 'markdown2<=2.4.8' pygments
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John Rouillard <rouilj@ieee.org>
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207 # docutils for ReStructuredText
6866
a3ad2d1a4ea1 spec mistune version; force socket on mysql invocation
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diff changeset
208 pip install beautifulsoup4 brotli docutils gpg jinja2 \
a3ad2d1a4ea1 spec mistune version; force socket on mysql invocation
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diff changeset
209 mistune==0.8.4 pyjwt pytz whoosh
6839
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parents:
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210
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211 - name: Install aux packages that need versions differences
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212 # if zstd fails install, keep going with test, don't abort
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213 run: |
6842
d8d4600c49eb More fixes to yaml using linter:
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parents: 6841
diff changeset
214 set -xv
6840
8ee17804086e untabify yml file.
John Rouillard <rouilj@ieee.org>
parents: 6839
diff changeset
215 pip install zstd || true
6861
097578791f7b mysql verbose and remove -u
John Rouillard <rouilj@ieee.org>
parents: 6860
diff changeset
216 if [[ "$PYTHON_VERSION" != "2."* ]]; then
6839
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parents:
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217 pip install Markdown; fi
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diff changeset
218
6867
25487b21f812 add xapian build/install
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parents: 6866
diff changeset
219 - name: Install xapian
25487b21f812 add xapian build/install
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diff changeset
220 run: |
7630
f4e415e56585 build: xapian under 3.12
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diff changeset
221 set -xv
6867
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222 sudo apt-get install libxapian-dev
25487b21f812 add xapian build/install
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223 # Sphinx required to build the xapian python bindings. Use 1.8.5 on
25487b21f812 add xapian build/install
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diff changeset
224 # older python and newest on newer.
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225 if [[ $PYTHON_VERSION == "2."* ]]; then pip install sphinx==1.8.5; fi
25487b21f812 add xapian build/install
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parents: 6866
diff changeset
226 if [[ $PYTHON_VERSION == '3.'* ]] ; then pip install sphinx; fi
7630
f4e415e56585 build: xapian under 3.12
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parents: 7629
diff changeset
227 XAPIAN_VER=$(dpkg -l libxapian-dev | tail -n 1 | awk '{print $3}' | cut -d '-' -f 1); echo $XAPIAN_VER;
6867
25487b21f812 add xapian build/install
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parents: 6866
diff changeset
228 cd /tmp
25487b21f812 add xapian build/install
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parents: 6866
diff changeset
229 curl -s -O https://oligarchy.co.uk/xapian/$XAPIAN_VER/xapian-bindings-$XAPIAN_VER.tar.xz
25487b21f812 add xapian build/install
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diff changeset
230 tar -Jxvf xapian-bindings-$XAPIAN_VER.tar.xz
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diff changeset
231 cd xapian-bindings-$XAPIAN_VER/
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diff changeset
232 if [[ $PYTHON_VERSION == "2."* ]]; then ./configure --prefix=$VIRTUAL_ENV --with-python --disable-documentation; fi
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diff changeset
233 # edit the configure script.
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234 # distutils.sysconfig.get_config_vars('SO') doesn't work for
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235 # 3.11 or newer.
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diff changeset
236 # Change distutils.sysconfig... to just sysconfig and SO
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diff changeset
237 # to EXT_SUFFIX to get valid value.
7628
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parents: 7627
diff changeset
238 if [[ $PYTHON_VERSION == "3."* ]]; then \
7630
f4e415e56585 build: xapian under 3.12
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parents: 7629
diff changeset
239 cp configure configure.FCS; \
7628
88c13f6dbc95 build: try 3.12 xapian build again.
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parents: 7627
diff changeset
240 sed -i \
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diff changeset
241 -e '/PYTHON3_SO=/s/distutils\.//g' \
88c13f6dbc95 build: try 3.12 xapian build again.
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diff changeset
242 -e '/PYTHON3_SO=/s/"SO"/"EXT_SUFFIX"/g' \
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parents: 7627
diff changeset
243 -e '/PYTHON3_CACHE_TAG=/s/imp;print(imp.get_tag())/sys;print(sys.implementation.cache_tag)/' \
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John Rouillard <rouilj@ieee.org>
parents: 7627
diff changeset
244 -e '/PYTHON3_CACHE_OPT1_EXT=/s/imp\.get_tag()/sys.implementation.cache_tag/g' \
7631
4f5a8b402b40 build: make sed sub global on line.
John Rouillard <rouilj@ieee.org>
parents: 7630
diff changeset
245 -e '/PYTHON3_CACHE_OPT1_EXT=/s/imp\b/importlib/g' \
7628
88c13f6dbc95 build: try 3.12 xapian build again.
John Rouillard <rouilj@ieee.org>
parents: 7627
diff changeset
246 configure; \
7632
0334d371ea11 build: prevent diff from exiting shell script.
John Rouillard <rouilj@ieee.org>
parents: 7631
diff changeset
247 diff -u configure.FCS configure || true; \
7628
88c13f6dbc95 build: try 3.12 xapian build again.
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parents: 7627
diff changeset
248 ./configure --prefix=$VIRTUAL_ENV --with-python3 --disable-documentation; \
7629
bad8affdcba7 build: fix indent in yaml.
John Rouillard <rouilj@ieee.org>
parents: 7628
diff changeset
249 fi
7628
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John Rouillard <rouilj@ieee.org>
parents: 7627
diff changeset
250 case "$PYTHON_VERSION" in nightly) echo skipping xapian build;; *) make && sudo make install; esac
6867
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diff changeset
251
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parents:
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252 - name: Test build roundup and install locale so lang tests work.
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parents:
diff changeset
253 run: |
6855
30815d9bd95c fix tab
John Rouillard <rouilj@ieee.org>
parents: 6854
diff changeset
254 sudo apt-get install gettext
6854
4f115313e262 install gettext for locale
John Rouillard <rouilj@ieee.org>
parents: 6853
diff changeset
255 python setup.py build
6840
8ee17804086e untabify yml file.
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parents: 6839
diff changeset
256 (cd locale; make local_install; ls -lR locale/de/LC_MESSAGES)
6839
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parents:
diff changeset
257
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parents:
diff changeset
258 # Run the tests using pytest with test files in tests directory.
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diff changeset
259 - name: Run tests
6858
John Rouillard <rouilj@ieee.org>
parents: 6857
diff changeset
260 run: |
6861
097578791f7b mysql verbose and remove -u
John Rouillard <rouilj@ieee.org>
parents: 6860
diff changeset
261 if [[ "$PYTHON_VERSION" != "2."* ]]; then
6858
John Rouillard <rouilj@ieee.org>
parents: 6857
diff changeset
262 pytest -r a \
7169
5cbe5f2a636b Add --durations=20 for detecting perf changes.
John Rouillard <rouilj@ieee.org>
parents: 7148
diff changeset
263 --durations=20 \
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264 -W default \
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265 -W "ignore:SelectableGroups:DeprecationWarning" \
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266 -W "ignore:the imp module:DeprecationWarning:gpg.gpgme:15" \
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267 -W "ignore:'U' mode::docutils.io" \
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268 -W "ignore:unclosed:ResourceWarning:roundup.roundup.demo" \
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269 -W "ignore:unclosed file:ResourceWarning:enum" \
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270 -v test/ --cov=roundup
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271 if [[ "$PYTHON_VERSION" != "3.6" ]]; then
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272 # coverage before 3.6 doesn't support lcov output
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273 coverage lcov
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274 fi
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275 else
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276 # python2 case
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277 pytest -v -r a --durations=20 test/ --cov=roundup
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278 fi
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279
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280 - name: Build docs
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281 run: python ./setup.py build_doc
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282
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283 - name: Upload coverage to Codecov
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284 # see: https://github.com/codecov/codecov-action#usage
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285 uses: codecov/codecov-action@4fe8c5f003fae66aa5ebb77cfd3e7bfbbda0b6b0 # v3.1.5
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286 with:
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287 verbose: true
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288 token: ${{ secrets.CODECOV_TOKEN }}
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289
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290 - name: Upload coverage to Coveralls
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291 # python 2.7 and 3.6 versions of coverage can't produce lcov files.
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292 if: matrix.python-version != '2.7' && matrix.python-version != '3.6'
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293 uses: coverallsapp/github-action@3dfc5567390f6fa9267c0ee9c251e4c8c3f18949 # v2.2.3
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294 with:
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295 github-token: ${{ secrets.GITHUB_TOKEN }}
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296 path-to-lcov: coverage.lcov
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297 parallel: run-{{ matrix.python-version }}-{{ matrix.os }}
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298
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299 #- name: test docker build current version ubuntu-latest
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300 # if: matrix.python-version == '3.10' && matrix.os == 'ubuntu-latest'
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301 # run: |
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302 # docker build -t roundup-app-dev -f scripts/Docker/Dockerfile .
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303 # mkdir tracker; chmod 777 tracker
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304 # docker run -d --rm -p 9017:8080 \
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305 # -v $PWD/tracker:/usr/src/app/tracker \
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306 # roundup-app-dev:latest demo
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307 # expect 200
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308 # curl --fail http://localhost:9017/demo/ > /dev/null
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309
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310 #- name: test docker build released pip version
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311 # run: |
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312 # docker build -t roundup-app-rel --build-arg="source=pypi" \
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313 # -f scripts/Docker/Dockerfile .
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314
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315
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316 - name: run benchmarks
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317 if: "contains(github.event.head_commit.message, 'benchmark')"
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318 run: INCI=1 python test/benchmark.py
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319
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320 # in parallel build coveralls requires a finish step
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321 finish:
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322 needs: test
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323 runs-on: ubuntu-latest
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324
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325 if: "!contains(github.event.head_commit.message, 'no-github-ci')"
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326
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327 steps:
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328 - name: Coveralls Finished
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329 uses: coverallsapp/github-action@3dfc5567390f6fa9267c0ee9c251e4c8c3f18949 # v2.2.3
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330 with:
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331 github-token: ${{ secrets.github_token }}
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332 parallel-finished: true
Roundup Issue Tracker: http://roundup-tracker.org/